HHsearch alignment for GI: 254781113 and conserved domain: PRK09500
>PRK09500 potC spermidine/putrescine ABC transporter membrane protein; Reviewed.
Probab=99.92 E-value=1.6e-23 Score=147.96 Aligned_cols=211 Identities=18% Similarity=0.220 Sum_probs=145.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 30899999999999999999999999999999999999999999706763799999999999855532222221112233
Q gi|254781113|r 3 YEWFNLIIDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLP 82 (226)
Q Consensus 3 ~~w~~~~~~~~~~~l~~~l~~Tl~~~~~~~~i~~~lg~~la~~~~~~~~~~~~~~~~~~i~~~r~iP~lv~l~~~~f~~~ 82 (226)
T Consensus 44 l~~y~~~f~~--~~~~~~~~nSl~ia~~~~~~~~~lg~~~A~~l~r~~~~~-~~~~~~l~~~p~~~P~~v~~i~l~~~~~ 120 (257)
T PRK09500 44 TKWYELLMNN--DSLLQAAQHSLTMAVFSATFATLIGSLTAVALYRYRFRG-KKFVSGMLFVVMMSPDIVMAISLLVLFM 120 (257)
T ss_pred HHHHHHHHCC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999879--379999999999999999999999999999997526774-5699999999999799999999999999
Q ss_pred HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 32101443333331001100000157899988752833689986517463565778752235764456778788987526
Q gi|254781113|r 83 HIGIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKS 162 (226)
Q Consensus 83 ~~g~~~~~~~~~ii~l~l~~~~~~~~i~r~~l~~v~~~~~EAA~alG~s~~q~~~~iilPqal~~ilp~l~~~~i~lik~ 162 (226)
T Consensus 121 ~~g~~-~~~~~lil~~~~~~lP~~~~~i~~~l~~i~~~l~EAA~~lGAs~~~~f~~VilPl~~P~i~~~~il~F~~s~~e 199 (257)
T PRK09500 121 LLGIQ-LGFWSLLFAHITFCLPFVVVTVYSRLKGFDVRMLEAAKDLGASEVTILRKIILPLAMPAVAAGWLLSFTLSMDD 199 (257)
T ss_pred HCCHH-HHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 73513-20999998888851502799999999717969999998729998796363129847999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 79999976999999999998---3235779999999999999999999999999998621
Q gi|254781113|r 163 TSVASTITIPEIFQTAQRIV---STTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQ 219 (226)
Q Consensus 163 tsl~s~ig~~el~~~a~~i~---~~~~~~~~~~~~~~~i~l~i~~~~~~l~~~lerr~~~ 219 (226)
T Consensus 200 f~~~~~l~g~~~~tlp~~i~~~~~~~~~--~~~~Ala~il~~i~~~~~~l~~~l~r~~~k 257 (257)
T PRK09500 200 VVVSSFVTGPSYEILPLKIYSMVKVGVS--PEVNALATILLVLSLVLVILSQLLARDKTK 257 (257)
T ss_pred HHHHHHHCCCCCEEHHHHHHHHHHCCCC--HHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 9999975289960289999999873787--599999999999999999999998665479