HHsearch alignment for GI: 254781113 and conserved domain: PRK10417
>PRK10417 nikC nickel transporter permease NikC; Provisional.
Probab=99.79 E-value=1.3e-17 Score=115.37 Aligned_cols=199 Identities=17% Similarity=0.191 Sum_probs=145.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 99999999999999999999999999999997067637999999999998555322222211122333210144333333
Q gi|254781113|r 16 LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIVFDSFVAII 95 (226)
Q Consensus 16 ~l~~~l~~Tl~~~~~~~~i~~~lg~~la~~~~~~~~~~~~~~~~~~i~~~r~iP~lv~l~~~~f~~~~~g~~~~~~~~~i 95 (226)
T Consensus 61 rll~G~r~sl~i~l~~~~~~~~iG~~lG~~ag~~gg-~~d~~~~~~~d~~~~iP~lll~i~l~~~~---g---~~~~~~i 133 (272)
T PRK10417 61 RLMAGTRVSLGSVMACLLLVLALGLVIGGSAGLLGG-RVDQATMRVADMFMTFPTSILSFFMVGVL---G---TGLTNVI 133 (272)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-CCCHHHHHHHHHHHCCCHHHHHHHHHHHC---C---CCCHHHH
T ss_conf 999999999999999999999999999999997187-61247777788986286287788888644---8---9725899
Q ss_pred CCHHHHHHHHHHHHHHHHHHHC-CCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--
Q ss_conf 1001100000157899988752-8336899865174635657787522357644567787889875267999997699--
Q gi|254781113|r 96 ISLTLNFSAYISEIIRSSIISI-PKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTITIP-- 172 (226)
Q Consensus 96 i~l~l~~~~~~~~i~r~~l~~v-~~~~~EAA~alG~s~~q~~~~iilPqal~~ilp~l~~~~i~lik~tsl~s~ig~~-- 172 (226)
T Consensus 134 l~l~l~~w~~~ar~iR~~~l~~~~~~yV~AAr~~G~s~~~I~~rhilPni~~~i~v~~~~~~~~~Il~~a~LsFLGlG~~ 213 (272)
T PRK10417 134 IAIALSHWAWYARMVRSLVISLRQREFVLASRLSGAGHVRVFVDHLLGAVIPSLLVLATLDIGHMMLHVAGLSFLGLGVT 213 (272)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 99999889999999999999999899999999839587783220176763789999999999999999999999047899
Q ss_pred -------HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf -------9999999998323577999999999999999999999999999862137478
Q gi|254781113|r 173 -------EIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYSV 224 (226)
Q Consensus 173 -------el~~~a~~i~~~~~~~~~~~~~~~~i~l~i~~~~~~l~~~lerr~~~~~~~~ 224 (226)
T Consensus 214 pp~~~WG~ml~~~~~~l~--~~pw~~-~~P~~~i~l~vl~~nllgd~Lrd~ldP~l~~~ 269 (272)
T PRK10417 214 APTAEWGVMINDARQFIW--TQPLLM-FWPGLALFISVMAFNLLGDALRDHLDPHLVTE 269 (272)
T ss_pred CCCCCHHHHHHHHHHHHH--HCHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 999889999999999999--784999-99999999999999999999999609664554