HHsearch alignment for GI: 254781113 and conserved domain: PRK10592
>PRK10592 putrescine transporter subunit: membrane component of ABC superfamily; Provisional.
Probab=99.93 E-value=2.3e-24 Score=152.53 Aligned_cols=205 Identities=17% Similarity=0.166 Sum_probs=137.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-----CC
Q ss_conf 9999999999999999999999999999999970676379999999999985553222222111223332101-----44
Q gi|254781113|r 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGIV-----FD 89 (226)
Q Consensus 15 ~~l~~~l~~Tl~~~~~~~~i~~~lg~~la~~~~~~~~~~~~~~~~~~i~~~r~iP~lv~l~~~~f~~~~~g~~-----~~ 89 (226)
T Consensus 59 ~~~~~a~~~Sl~ia~~~t~i~~~lG~~~A~~l~r~~~~~g~~~~~~l~~~Pl~vP~iv~gl~l~~~f~~~g~~~g~~~~~ 138 (281)
T PRK10592 59 DAMMSAVGLSLTIAACAATMAAILGTIAAVVMVRFGRFRGSNGFAFMITAPLVMPDVITGLSLLLLFVALGHAIGWPADR 138 (281)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHC
T ss_conf 78999999999999999999999999999999980553306999999998998678999999999999846322532002
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 33333310011000001578999887528336899865174635657787522357644567787889875267999997
Q gi|254781113|r 90 SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVASTI 169 (226)
Q Consensus 90 ~~~~~ii~l~l~~~~~~~~i~r~~l~~v~~~~~EAA~alG~s~~q~~~~iilPqal~~ilp~l~~~~i~lik~tsl~s~i 169 (226)
T Consensus 139 ~~~~i~i~~~~~~~P~~~~~i~a~l~~id~~leEAA~~LGAs~~~~f~~V~LPli~Pgiiag~il~F~~s~~ef~~~~~l 218 (281)
T PRK10592 139 GMLTIWLAHVTFCTAYVAVVISSRLRELDRSIEEAAMDLGATPLKVFFVITLPMIMPAIISGWLLAFTLSLDDLVIASFV 218 (281)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHE
T ss_conf 37899999999999999999999998589279999988199988883435417115989999999999999877788621
Q ss_pred HHHHHHHHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 6999999999998---323577999999999999999999999999999862137
Q gi|254781113|r 170 TIPEIFQTAQRIV---STTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHT 221 (226)
Q Consensus 170 g~~el~~~a~~i~---~~~~~~~~~~~~~~~i~l~i~~~~~~l~~~lerr~~~~~ 221 (226)
T Consensus 219 ~g~~~~TLpv~iy~~~~~~~~p--~~~A~~~l~~~v~~~~~~ia~~l~~R~~k~r 271 (281)
T PRK10592 219 SGPGATTLPMLVFSSVRMGVNP--EINALATLILGVVGIVGFIAWYLMARAEKQR 271 (281)
T ss_pred ECCCCCCHHHHHHHHHHCCCCH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 0899845699999998717987--9999999999999999999999998889887