HHsearch alignment for GI: 254781113 and conserved domain: PRK10782
>PRK10782 DL-methionine transporter permease subunit; Provisional.
Probab=100.00 E-value=9.8e-45 Score=264.31 Aligned_cols=207 Identities=20% Similarity=0.294 Sum_probs=181.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 9999999999999999999999999999999999------7067637999999999998555322222211122333210
Q gi|254781113|r 13 FPQLLYAAIVVTLPIACISFVISLIIGFFIAVIR------IFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIGI 86 (226)
Q Consensus 13 ~~~~l~~~l~~Tl~~~~~~~~i~~~lg~~la~~~------~~~~~~~~~~~~~~~i~~~r~iP~lv~l~~~~f~~~~~g~ 86 (226)
T Consensus 5 ~~~lll~g~~~Tl~mt~~s~~~~~iiglplGi~l~~~~~~~~~~~~~l~~~~~~~i~~~R~iP~lv~l~~~~~~~~~~~g 84 (217)
T PRK10782 5 MMWLLVRGVWETLAMTFVSGFFGFVIGLPVGVLLYVTRPGQIIANAKLYRTLSAVVNIFRSIPFIILLVWMIPFTRVIVG 84 (217)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 99999999999999999999999999999999999732022443468999999999999506899999999999999844
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 14433333310011000001578999887528336899865174635657787522357644567787889875267999
Q gi|254781113|r 87 VFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTSVA 166 (226)
Q Consensus 87 ~~~~~~~~ii~l~l~~~~~~~~i~r~~l~~v~~~~~EAA~alG~s~~q~~~~iilPqal~~ilp~l~~~~i~lik~tsl~ 166 (226)
T Consensus 85 ~~~g~~aaiiaL~i~~~~~iar~~~~~i~~V~~g~~EAa~alG~s~~q~i~~viLPqAlp~ii~~~~~~~i~~i~~tsl~ 164 (217)
T PRK10782 85 TSIGLQAAIVPLTVGAAPFIARMVENALLEIPTGLIEASRAMGATPMQIVRKVLLPEALPGLVNAATITLITLVGYSAMG 164 (217)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 66216899999999998999999999998399879999998398988994851079219999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 997699999999999832357799999999999999999999999999986213
Q gi|254781113|r 167 STITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 (226)
Q Consensus 167 s~ig~~el~~~a~~i~~~~~~~~~~~~~~~~i~l~i~~~~~~l~~~lerr~~~~ 220 (226)
T Consensus 165 g~IG~ggLG~~a~~~~~~~~~~~~~~~v~-~l~~ilv~~i~~~~~~l~k~~~~r 217 (217)
T PRK10782 165 GAVGAGGLGQIGYQYGYIGYNATVMNTVL-VLLVILVYLIQFAGDRIVRAVTHK 217 (217)
T ss_pred HHHCCCHHHHHHHHHHHHHCCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 99810478999999999851510999999-999999999999999999986379