HHsearch alignment for GI: 254781113 and conserved domain: PRK11122
>PRK11122 artM arginine transporter permease subunit ArtM; Provisional.
Probab=100.00 E-value=0 Score=334.39 Aligned_cols=210 Identities=26% Similarity=0.558 Sum_probs=195.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----
Q ss_conf 999999999999999999999999999999999999970676379999999999985553222222111223332-----
Q gi|254781113|r 10 IDSFPQLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHI----- 84 (226)
Q Consensus 10 ~~~~~~~l~~~l~~Tl~~~~~~~~i~~~lg~~la~~~~~~~~~~~~~~~~~~i~~~r~iP~lv~l~~~~f~~~~~----- 84 (226)
T Consensus 2 le~~P~l-l~G~~~Tl~l~~~s~~~~~~lG~~la~~r-~~~~~~l~~~~~~yv~~~Rg~PlLv~lf~~yfg~~~~~~l~~ 79 (222)
T PRK11122 2 LEYLPEL-LKGLHTSLTLTVASLLVALVLALIFTIIL-TLKTPVLVWLVRGYITLFTGTPLLVQIFLIYYGPGQFPWLQE 79 (222)
T ss_pred HHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHC
T ss_conf 7469999-99999999999999999999999999999-879778999999999999564699999999981488877750
Q ss_pred -----HCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf -----101443333331001100000157899988752833689986517463565778752235764456778788987
Q gi|254781113|r 85 -----GIVFDSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISI 159 (226)
Q Consensus 85 -----g~~~~~~~~~ii~l~l~~~~~~~~i~r~~l~~v~~~~~EAA~alG~s~~q~~~~iilPqal~~ilp~l~~~~i~l 159 (226)
T Consensus 80 ~~~~~~~~~~~~~~~viaL~l~~~Ay~aEi~R~gi~sV~~GQ~EAA~slGls~~q~~r-IilPQa~r~~lP~l~n~~i~l 158 (222)
T PRK11122 80 YPWLWHLLSQPWLCAMLALALNSAAYSTQLFYGAIRAIPEGQWQSCSALGMSKKQTLA-ILLPYAFKRALSSYSNEVVLV 158 (222)
T ss_pred CCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHH
T ss_conf 3035320225999999999999999999999999960998799999986989999999-899999999866889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 5267999997699999999999832357799999999999999999999999999986213747
Q gi|254781113|r 160 LKSTSVASTITIPEIFQTAQRIVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQHTYS 223 (226)
Q Consensus 160 ik~tsl~s~ig~~el~~~a~~i~~~~~~~~~~~~~~~~i~l~i~~~~~~l~~~lerr~~~~~~~ 223 (226)
T Consensus 159 iK~TsL~s~Igv~El~~~a~~i~~~t~~~~-~y~~~a~~Y~~i~~~~~~~~~~lErR~~~~~rr 221 (222)
T PRK11122 159 FKGTSLAYTITLMDVMGYSQLLYGRTYDVM-VFGAAGIIYLVVNGLLTLLMRLIERKALAFERR 221 (222)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 998499999989999999999997416099-999999999999999999999999987655335