>TIGR00969 3a0106s02 sulfate ABC transporter, permease protein; InterPro: IPR005667 Bacterial binding protein-dependent transport systems , are multicomponent systems typically composed of a periplasmic substrate-binding protein, one or two reciprocally homologous integral inner-membrane proteins and one or two peripheral membrane ATP-binding proteins that couple energy to the active transport system. The integral inner-membrane proteins translocate the substrate across the membrane. It has been shown , that most of these proteins contain a conserved region located about 80 to 100 residues from their C-terminal extremity. This region seems to be located in a cytoplasmic loop between two transmembrane domains. Apart from the conserved region, the sequence of these proteins is quite divergent, and they have a variable number of transmembrane helices, This entry describes a subfamily of both CysT and CysW, paralogous and generally tandemly encoded permease proteins of the sulphate ABC transporter; GO: 0015563 uptake transmembrane transporter activity, 0006810 transport, 0016020 membrane.

Probab=99.79 E-value=1.4e-18 Score=120.71 Aligned_cols=199 Identities=13% Similarity=0.112 Sum_probs=133.0 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHCCCC--- Q ss_conf 9999999999999999999999999999999706763799999999999855532222---2211122333210144--- Q gi|254781113|r 16 LLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQ---LFVIFYGLPHIGIVFD--- 89 (226) Q Consensus 16 ~l~~~l~~Tl~~~~~~~~i~~~lg~~la~~~~~~~~~~~~~~~~~~i~~~r~iP~lv~---l~~~~f~~~~~g~~~~--- 89 (226) T Consensus 66 ~~~~A~~lT~~~aliav~lN~vFG~~~AWvLtR~~F-PGr~lLda~~DLPFAlspvVAGL~l~llYg~~Gw~G~~~~~fg 144 (280) T TIGR00969 66 NAVSAYNLTLLMALIAVPLNGVFGLLIAWVLTRYQF-PGRKLLDALIDLPFALSPVVAGLTLALLYGSNGWLGSWLASFG 144 (280) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-CCHHHHHHHHHCCCCCCHHHHHHEEEEEECCCCCCCCHHHHCC T ss_conf 899999999999999999999999999999971269-8258999986213342506753300045357785113230178 Q ss_pred -----CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf -----333333100110000015789998875283368998651746356577875223576445677878898752679 Q gi|254781113|r 90 -----SFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFISILKSTS 164 (226) Q Consensus 90 -----~~~~~ii~l~l~~~~~~~~i~r~~l~~v~~~~~EAA~alG~s~~q~~~~iilPqal~~ilp~l~~~~i~lik~ts 164 (226) T Consensus 145 iqI~F~~~G~~lAmiFvs~PFVvRev~PVL~Elg~e~EEAA~tLGA~~WQtFwRV~LP~i~w~llyGv~Lt~aRAlGEFG 224 (280) T TIGR00969 145 IQIIFTWPGVALAMIFVSLPFVVREVQPVLEELGTEAEEAAATLGASGWQTFWRVTLPSIRWALLYGVVLTFARALGEFG 224 (280) T ss_pred CEEEEECCCEEEEEEEECCCCEEEEECCCHHHCCCCHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCE T ss_conf 68998412146665342168045431001341385578999862899830267876688726788867876556543011 Q ss_pred ----HHHHHHHHHHHHHHHH-HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf ----9999769999999999-983235779999999999999999999999999998 Q gi|254781113|r 165 ----VASTITIPEIFQTAQR-IVSTTYQPLIIYCELAFVYLILTSFCYIIQIKIESS 216 (226) Q Consensus 165 ----l~s~ig~~el~~~a~~-i~~~~~~~~~~~~~~~~i~l~i~~~~~~l~~~lerr 216 (226) T Consensus 225 aV~~vSgni~gkt~~lplli~~~l~~Yd~~gA~~ia~vL-~l~slv~L~~~~~Lq~R 280 (280) T TIGR00969 225 AVVVVSGNIPGKTLTLPLLIFERLEQYDYPGAYVIAAVL-LLVSLVTLFLINLLQAR 280 (280) T ss_pred EEEEEECCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHH-HHHHHHHHHHHHHHHCC T ss_conf 078994468863120156644476603607899999999-99999999999985039

HHsearch alignment for GI: 254781113 and conserved domain: TIGR00969