HHsearch alignment for GI: 254781113 and conserved domain: TIGR03226
>TIGR03226 PhnU 2-aminoethylphosphonate ABC transporter, permease protein. This ABC transporter permease (membrane-spanning) component is found in a region of the salmonella typhimurium LT2 genome responsible for the catabolism of 2-aminoethylphosphonate via the phnWX pathway (GenProp0238).
Probab=99.93 E-value=6.7e-25 Score=155.44 Aligned_cols=205 Identities=15% Similarity=0.138 Sum_probs=147.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------
Q ss_conf 99999999999999999999999999999999706763799999999999855532222221112233321---------
Q gi|254781113|r 15 QLLYAAIVVTLPIACISFVISLIIGFFIAVIRIFFSDTIISLIMHFYVWIFRGTPLLVQLFVIFYGLPHIG--------- 85 (226)
Q Consensus 15 ~~l~~~l~~Tl~~~~~~~~i~~~lg~~la~~~~~~~~~~~~~~~~~~i~~~r~iP~lv~l~~~~f~~~~~g--------- 85 (226)
T Consensus 88 ~~~~~al~nTl~~a~~~t~~~lvlG~~lA~~L~r~~f~-g~~~l~~ll~lp~~lP~~v~a~a~~~l~~~~G~ln~~L~~l 166 (312)
T TIGR03226 88 HDFRDALGNTLQIAFAAAAGALLLGSALAAILFFIPFP-GAELIGRFLDLFIAFPSFLIAFAFIFIYGSAGLLNGALMRA 166 (312)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
T ss_conf 67999999999999999999999999999999962376-28999999999999889999999999983577077999996
Q ss_pred --CCC------CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf --014------433333310011000001578999887528336899865174635657787522357644567787889
Q gi|254781113|r 86 --IVF------DSFVAIIISLTLNFSAYISEIIRSSIISIPKGQWDASYAIGLTRKQTIRHIILPQTITTSAVPLSSEFI 157 (226)
Q Consensus 86 --~~~------~~~~~~ii~l~l~~~~~~~~i~r~~l~~v~~~~~EAA~alG~s~~q~~~~iilPqal~~ilp~l~~~~i 157 (226)
T Consensus 167 ~gl~~~p~~~l~s~~gVvla~i~~~~Pf~~l~~~a~l~~id~~l~EAA~~lGAs~~~~Fr~VtLPll~P~i~ag~lL~Fi 246 (312)
T TIGR03226 167 FAFDAPPLDFLFGAGGVILAEITFFTPFVMRPLLAAFAQIDKRLLEAASILGAHGLMLAGQVIFPAALPAIAAGGILCFL 246 (312)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 28667745777409999999999989999999999999689789999988499988867874278468999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 875267999997699999999999832--357799999999999999999999999999986213
Q gi|254781113|r 158 SILKSTSVASTITIPEIFQTAQRIVST--TYQPLIIYCELAFVYLILTSFCYIIQIKIESSVTQH 220 (226)
Q Consensus 158 ~lik~tsl~s~ig~~el~~~a~~i~~~--~~~~~~~~~~~~~i~l~i~~~~~~l~~~lerr~~~~ 220 (226)
T Consensus 247 ~~~~~F~~~~~lgg~~~~tl~~~Iy~~~~~~~d~~~AaAlavillv~~l~l~~l~r~~~rR~~~~ 311 (312)
T TIGR03226 247 LTLNEFGILLFIGAAGLITLPMAIYSKAILDIDLPAAAAGALIMIALSLALFALYRLAARRAGEG 311 (312)
T ss_pred HHHHHHCCEEEEECCCCEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 99977541134408997017999999998757989999999999999999999999998763489