RPS-BLAST 2.2.22 [Sep-27-2009] Database: scop70_1_75 13,730 sequences; 2,407,596 total letters Searching..................................................done Query= gi|254781114|ref|YP_003065527.1| glycosyl transferase family protein [Candidatus Liberibacter asiaticus str. psy62] (263 letters) >d1z7ga1 c.61.1.1 (A:4-217) Hypoxanthine-guanine PRTase (HGPRTase) {Human (Homo sapiens) [TaxId: 9606]} Length = 214 Score = 25.7 bits (56), Expect = 4.3 Identities = 15/105 (14%), Positives = 38/105 (36%), Gaps = 5/105 (4%) Query: 83 SPAIGAIILEDDADFSDEFSQLLPHLSKCDINNILIKFDALRKKPKKDSYLCTLPGNFDI 142 SP + +I +D+ + + + H ++ D+ + I + + ++ + Sbjct: 1 SPGV--VISDDEPGYDLDLFCIPNHYAE-DLERVFIPHGLIMDRTERLARDVM--KEMGG 55 Query: 143 HQPRILSPRTTGYFIGKEAAIHLLNVRKNIYRPIDMDMKHWWEHN 187 H L GY + ++ + +N R I M + + Sbjct: 56 HHIVALCVLKGGYKFFADLLDYIKALNRNSDRSIPMTVDFIRLKS 100 >d2fh5a1 d.110.4.4 (A:1-129) Signal recognition particle receptor alpha subunit, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 129 Score = 24.4 bits (53), Expect = 10.0 Identities = 14/52 (26%), Positives = 24/52 (46%), Gaps = 4/52 (7%) Query: 58 FKRLLSLPEIGCYISHIHLWKRIAYSPAIG----AIILEDDADFSDEFSQLL 105 F+++L+L + I +H R Y I +L DF ++F +LL Sbjct: 70 FQKILTLTYVDKLIDDVHRLFRDKYRTEIQQQSALSLLNGTFDFQNDFLRLL 121 Database: scop70_1_75 Posted date: Mar 27, 2010 6:21 PM Number of letters in database: 2,407,596 Number of sequences in database: 13,730 Lambda K H 0.324 0.139 0.447 Gapped Lambda K H 0.267 0.0556 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 13730 Number of Hits to DB: 1,096,526 Number of extensions: 52473 Number of successful extensions: 135 Number of sequences better than 10.0: 1 Number of HSP's gapped: 135 Number of HSP's successfully gapped: 8 Length of query: 263 Length of database: 2,407,596 Length adjustment: 84 Effective length of query: 179 Effective length of database: 1,254,276 Effective search space: 224515404 Effective search space used: 224515404 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.6 bits) S2: 52 (24.2 bits)