HHsearch alignment for GI: 254781115 and conserved domain: COG2844
>COG2844 GlnD UTP:GlnB (protein PII) uridylyltransferase [Posttranslational modification, protein turnover, chaperones].
Probab=98.36 E-value=2.4e-06 Score=62.02 Aligned_cols=190 Identities=14% Similarity=0.056 Sum_probs=123.7
Q ss_pred HHCCCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHHCCC-CC-HHHHHHHHHHHHC-CCCHHHHHHHHHHCCCCCCCCC
Q ss_conf 0104210033201220136433111100012333321022-20-5776887886421-1018999998753002334688
Q gi|254781115|r 160 ILEDYLRILRFFRFFAHYGEKNIDSDGLVASIKAKKGLKI-LS-SERIWSEINKLLE-AKNPLNAIVHMYNGGIFKEIFL 236 (416)
Q Consensus 160 f~EDpLRiLRa~RFasrlg~f~id~~t~~ai~~~~~~L~~-iS-~ERI~~El~KiL~-~~~~~~~l~~L~~~gll~~ifp 236 (416)
T Consensus 349 f~~dP~~ilrlf~~~~~~~~~~~~~~Tlr~L~~a~~~l~~~l~~~peA~~~Fl~il~~~~~~~r~l~~Mn~~GVLgrylP 428 (867)
T COG2844 349 FERDPEAILRLFAIMAQTGLITGHPDTLRQLRRALRLLNQPLREDPEARRLFLSILRSPNAIRRTLRPMNRYGVLGRYLP 428 (867)
T ss_pred HHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC
T ss_conf 22086999999999864388555748999999750125861113988999999998389857899997777434887553
Q ss_pred CCCCCC------------HHH-HHHHHH-HHH------H----------CCCCCCHHHHHHHHCCCCCH-----------
Q ss_conf 701058------------578-987786-776------3----------17880167666520477685-----------
Q gi|254781115|r 237 DVQEIS------------LDQ-LSQVIE-AEQ------V----------FEWKIDSLLRFIVLISWQDK----------- 275 (416)
Q Consensus 237 el~~~~------------~~~-l~~~~~-~~~------~----------~~~~~~~~lrla~Ll~~~~~----------- 275 (416)
T Consensus 429 ew~~Ivg~MQfdlfH~YTVDeH~lr~v~~l~~~a~~~~~~~hPl~~~l~~~~~~~elLylAaLfHDIaKGRggDHs~lGA 508 (867)
T COG2844 429 EWGKIVGLMQFDLFHIYTVDEHTLRVVLKLARFARGEARHEHPLASQLMPRLEKRELLYLAALFHDIAKGRGGDHSILGA 508 (867)
T ss_pred CHHHHHCCCCCCCCEECCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHH
T ss_conf 37765402466743012242999999998887501212334752676503788731999999988862378986677619
Q ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCC-------CCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHH
Q ss_conf 78998875303425677778888754114333-------67246678998708024551698999864077760138999
Q gi|254781115|r 276 KSILSMAKKFSLPREIRYFLISFFNCNFNQKT-------LSIPEIKKLFYLYGDKVMIAKLKIFLALHYNNLTHQDTCFI 348 (416)
Q Consensus 276 ~~~~~~~~rlkl~~~~~~~l~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 348 (416)
T Consensus 509 ~~a~~fc~~hGL~~~e~~lvaWLVe~HLlMS~tAQrrDl~Dp~vI~~Fa~~Vq~~~rL~~L~~LTVaDI~AtgP~vWN~W 588 (867)
T COG2844 509 EDARRFCERHGLNSRETELVAWLVENHLLMSVTAQRRDLNDPKVIDAFAEAVQDEERLRYLLVLTVADIRATGPGVWNSW 588 (867)
T ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHH
T ss_conf 99999999829987776899999998777678887617898699999999856889988999988776506686503788
Q ss_pred H
Q ss_conf 9
Q gi|254781115|r 349 L 349 (416)
Q Consensus 349 ~ 349 (416)
T Consensus 589 K 589 (867)
T COG2844 589 K 589 (867)
T ss_pred H
T ss_conf 9