HHsearch alignment for GI: 254781115 and conserved domain: cd07749
>cd07749 NT_Pol-beta-like_1 Nucleotidyltransferase (NT) domain of an uncharacterized subgroup of the Pol beta-like NT superfamily. The Pol beta-like NT superfamily includes DNA polymerase beta and other family X DNA Polymerases, as well as Class I and Class II CCA-adding enzymes, RelA- and SpoT-like ppGpp synthetases and hydrolases, 2'5'-oligoadenylate (2-5A)synthetases, Escherichia coli adenylyltransferase (GlnE), Escherichia coli uridylyl transferase (GlnD), poly(A) polymerases, terminal uridylyl transferases, Staphylococcus aureus kanamycin nucleotidyltransferase, and similar proteins. Proteins belonging to this subgroup are uncharacterized. In the majority of the Pol beta-like superfamily NTs, two carboxylates, Dx[D/E], together with a third more distal carboxylate, coordinate two divalent metal cations essential for catalysis. These divalent metal ions are involved in a two-metal ion mechanism of nucleotide addition. These carboxylate residues are conserved in this subgroup.
Probab=95.96 E-value=0.12 Score=30.51 Aligned_cols=109 Identities=17% Similarity=0.149 Sum_probs=70.3
Q ss_pred HHHHHHHHHHHCCCEEEEEHHHHHHHHCCCC--CCEEEEEEE-CCHHHHHHHHHHCCCCEECCC------CCCCEEEEEE
Q ss_conf 8999999999789859997069988877889--860899980-898999999987699562134------3144699998
Q gi|254781115|r 14 DLINILSLLNKGEDKSCIVGGAVRDSLMNLS--VQDIDIATT-ILPDRVMRIFSKTRYKVIPTS------ISYGTIKIIC 84 (416)
Q Consensus 14 ~~~~i~~~l~~~g~~~~~VGG~VRD~ll~~~--~~DiD~~~~-~~~~~~~~~~~~~~~~~~~~~------~~~gt~~~~~ 84 (416)
T Consensus 5 ~L~~i~~~l~~~nI-~W~v~gS~~l~~~Gl~~~p~DIDi~~d~~~~~~i~~if~~~~~~~~~~~s~~~~~s~F--ge~~I 81 (156)
T cd07749 5 ALRKFYERLKNINV-NWALTGSLSFALQGVPVEPHDIDIQTDNEGAYEIERIFHEFVNTEVRFSESEGIRSHF--GELQI 81 (156)
T ss_pred HHHHHHHHHCCCCC-EEEEHHHHHHHHCCCCCCCCCCEEEECHHHHHHHHHHHHHHCCCCCCCCCCCCHHCEE--EEEEE
T ss_conf 99999997343796-3983135889975999998623478624009999999999605677778765110000--48898
Q ss_pred CCEEEEEECCCCCC-CCCCCCCCCCCCHHHHHHCCCCCCCCCCEEECC
Q ss_conf 99888642134466-768874322332013321044780030020003
Q gi|254781115|r 85 RKKYFDITTLRSDL-ITDGRYAKVVFTRDWKADSLRRDFTINALYADQ 131 (416)
Q Consensus 85 ~~~~~di~~~R~e~-~~~~~~~~~~~~~~~~eDl~RRDFTINAla~~~ 131 (416)
T Consensus 82 ~g~~VdIM~-d~~~~~~~g~~e~p~d~~-----~~~~~vei~G~~IPv 123 (156)
T cd07749 82 DGIKVEIMG-DVQKRLEDGWWETPVDLN-----RYKRFVEVEGMKIPV 123 (156)
T ss_pred CCEEEEEEC-CEEEECCCCEEECCCCCH-----HHHHHHEECCEECCC
T ss_conf 788889962-516751897671552431-----355440276677356