HHsearch alignment of GI: 254781115 and MMDB domain: 1ou5_A_283-448

>1ou5_A (A:283-448) TRNA CCA-adding enzyme, tRNA-nucleotidyltransferase; polymerase, translation; 3.40A {Homo sapiens}
Probab=99.72  E-value=1.1e-17  Score=137.51  Aligned_cols=164  Identities=16%  Similarity=0.286  Sum_probs=122.8

Q ss_pred             CCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCH-HHH
Q ss_conf             8870105857898778677631788016766652047768578998875303425677778888754114333672-466
Q gi|254781115|r  235 FLDVQEISLDQLSQVIEAEQVFEWKIDSLLRFIVLISWQDKKSILSMAKKFSLPREIRYFLISFFNCNFNQKTLSI-PEI  313 (416)
Q Consensus       235 fpel~~~~~~~l~~~~~~~~~~~~~~~~~lrla~Ll~~~~~~~~~~~~~rlkl~~~~~~~l~~~~~~~~~~~~~~~-~~~  313 (416)
                      ||+..+  .+.+.+..+.  ......+++++|++|+|+.+  .+..++++|++|++.++.+..+...+........ ...
T Consensus         1 lP~~~~--~~~~~~~l~~--~~~~~~~~~~~laaL~~~~~--~~~~~l~~Lkls~~~~~~i~~l~~~~~~~~~~~~~~~~   74 (166)
T 1ou5_A            1 LPANAS--LEEFDKVSKN--VDGFSPKPVTLLASLFKVQD--DVTKLDLRLKIAKEEKNLGLFIVKNRKDLIKATDSSDP   74 (166)
T ss_dssp             CCCCSC--CHHHHHHHHH--HTTSCCCHHHHHGGGCCSTT--TTHHHHHHHCCCTTHHHHHHHHTTTTTTTSCCCSSSST
T ss_pred             CHHHHH--HHHHHHHHHH--HHHCCCHHHHHHHHHHCCHH--HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHH
T ss_conf             076666--8899999999--85257036678999861224--57789987521499999999999999999872020547


Q ss_pred             HHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHH
Q ss_conf             78998708024551698999864077760138999999987751288888988789996589877799999999999996
Q gi|254781115|r  314 KKLFYLYGDKVMIAKLKIFLALHYNNLTHQDTCFILQVLSDIIHWKKPLFPLTGDDVVKYGIPPGKKVGNILVHCKQEWI  393 (416)
Q Consensus       314 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~pI~G~dL~~~Gi~pGp~iG~iL~~l~~~~i  393 (416)
                      .+.++.++.+.......+..+..      .....+...+++...+..|.++|||+|||++|++|||++|++|++++++|+
T Consensus        75 ~~~~~~~~~~~~~~~~~l~~~~~------~~~~~~~~~~~~~~~~~~~~~~i~G~DLi~lG~~~Gp~ig~iL~~l~~~~l  148 (166)
T 1ou5_A           75 LKPYQDFIIDSREPDATTRVCEL------LKYQGEHCLLKEMQQWSIPPFPVSGHDIRKVGISSGKEIGALLQQLREQWK  148 (166)
T ss_dssp             THHHHHHHHHCCSTTHHHHHHHH------HHHHTCHHHHHHHTTCCC---------------------------------
T ss_pred             HHHHHHHHHHCCCCHHHHHHHHH------HHCCCHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHH
T ss_conf             99999999851362679999998------754478999999971788999919999987879703899999999999999


Q ss_pred             CCCCCCCHHHHHHHHHH
Q ss_conf             38888898999999999
Q gi|254781115|r  394 NSSFQLSQEDLHHLLRK  410 (416)
Q Consensus       394 ~~~~~n~~e~l~~~lk~  410 (416)
                      +|+++|+++++..++++
T Consensus       149 ~~~~~n~ke~ll~~~k~  165 (166)
T 1ou5_A          149 KSGYQMEKDELLSYIKK  165 (166)
T ss_dssp             -----------------
T ss_pred             HCCCCCCHHHHHHHHCC
T ss_conf             78499999999998454