HHsearch alignment of GI: 254781115 and MMDB domain: 3h38_A_1-160
>3h38_A (A:1-160) TRNA nucleotidyl transferase-related protein; transferase/RNA, nucleotide-binding, RNA-binding; 2.37A {Thermotoga maritima} PDB: 3h37_A 3h39_A* 3h3a_A*
Probab=100.00 E-value=1.2e-38 Score=277.81 Aligned_cols=132 Identities=26% Similarity=0.263 Sum_probs=121.8
Q ss_pred HHHHHHHHHCCCEEEEEHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHCCCCEECCCCCCCEEEE-EECCEEEEEECC
Q ss_conf 9999999978985999706998887788986089998089899999998769956213431446999-989988864213
Q gi|254781115|r 16 INILSLLNKGEDKSCIVGGAVRDSLMNLSVQDIDIATTILPDRVMRIFSKTRYKVIPTSISYGTIKI-ICRKKYFDITTL 94 (416)
Q Consensus 16 ~~i~~~l~~~g~~~~~VGG~VRD~ll~~~~~DiD~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~-~~~~~~~di~~~ 94 (416)
..+.+.+.++|+++|+|||||||+|||++++||||+|++.|+++++.|.+...+...++.+|||+.+ ..++..+||+++
T Consensus 24 ~~l~~~~~~~g~~~ylVGG~VRD~Llg~~~~DiDi~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~idi~~~ 103 (160)
T 3h38_A 24 RLLGKFGDEVNMPVYVVGGFVRDLLLGIKNLDIDIVVEGNALEFAEYAKRFLPGKLVKHDKFMTASLFLKGGLRIDIATA 103 (160)
T ss_dssp HHHHHHHHHTTCCEEEETHHHHHHHHTCCCCCEEEEESSCHHHHHHHHHTTSCEEEECCSSTTEEEEEETTSCEEEEEEC
T ss_pred HHHHHHHHHCCCEEEEEEHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHCCCEEEECCEEEEEEEEEECCEEEEEECC
T ss_conf 99999999749969996369999877988999899967988999999998679859965707999999979879997544
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCEEECCC----CHHHHHCCCHHHHHH
Q ss_conf 44667688743223320133210447800300200032----101320000688878
Q gi|254781115|r 95 RSDLITDGRYAKVVFTRDWKADSLRRDFTINALYADQQ----GKVIDYVGGLNDLRN 147 (416)
Q Consensus 95 R~e~~~~~~~~~~~~~~~~~eDl~RRDFTINAla~~~~----~~l~Dp~gG~~DL~~ 147 (416)
|+|.|+.+++.++++..++++||.|||||||||||++. |+|+|||||++||++
T Consensus 104 R~e~~~~~~~~~~~~~~~l~eDl~rRDFTINAla~~l~~~~~g~liDp~~G~~DL~~ 160 (160)
T 3h38_A 104 RLEYYESPAKLPDVEMSTIKKDLYRRDFTINAMAIKLNPKDFGLLIDFFGGYRDLKE 160 (160)
T ss_dssp CEECCSSSSSCCEESCCCHHHHHHTSSBGGGSCEEECSGGGTTEEECSSSHHHHHHT
T ss_pred CCCCCCCCCCCCEEEECCHHHHHHCCCHHHHHHHHCCCCCCCCEEECCCCCHHHHHH
T ss_conf 122355789898334256266442010666665403456776424246773576766