HHsearch results for GI: 254781115 and protein with PDBid: 1ou5_A
>1ou5_A TRNA CCA-adding enzyme, tRNA-nucleotidyltransferase; polymerase, translation; 3.40A {Homo sapiens} SCOP: a.173.1.1 d.218.1.4
Probab=100.00 E-value=0 Score=655.31 Aligned_cols=391 Identities=31% Similarity=0.508 Sum_probs=325.7
Q ss_pred CCCHHC---CCHHHHHHHHHHHHCCCEEEEEHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHCCCCEEC-CCCCCCEE
Q ss_conf 575221---99889999999997898599970699888778898608999808989999999876995621-34314469
Q gi|254781115|r 5 VQHKWF---HDSDLINILSLLNKGEDKSCIVGGAVRDSLMNLSVQDIDIATTILPDRVMRIFSKTRYKVIP-TSISYGTI 80 (416)
Q Consensus 5 ~~~~~~---~~~~~~~i~~~l~~~g~~~~~VGG~VRD~ll~~~~~DiD~~~~~~~~~~~~~~~~~~~~~~~-~~~~~gt~ 80 (416)
.++|++ ..+++.+|++.+.++|+++|+|||||||+|||++++|+||||+++|++++++|++.+.+.+. .|.+|||+
T Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~g~e~y~VGG~VRD~llg~~~~DiDi~~~~~p~~~~~~~~~~~~~~~~~~g~~~gt~ 125 (448)
T 1ou5_A 46 LQSPEFQSLFTEGLKSLTELFVKENHELRIAGGAVRDLLNGVKPQDIDFATTATPTQMKEMFQSAGIRMINNRGEKHGTI 125 (448)
T ss_dssp CCCHHHHHHSCTTHHHHHHHHHHTTCCEEEESTTTHHHHHTSCCSSCEEEESSCHHHHHHHHTTTTCCBCCCCCTTCCCE
T ss_pred CCCHHHHHHCCHHHHHHHHHHHHCCCEEEEECHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHCCCCCCCCCCCCCEEE
T ss_conf 37813454368899999999998799899973699998779889998999948899999999974981047678413189
Q ss_pred EEEECCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCEEECCCCHHHHHCCCHHHHHHHHHHHCCCCCCHH
Q ss_conf 99989988864213446676887432233201332104478003002000321013200006888787776427643100
Q gi|254781115|r 81 KIICRKKYFDITTLRSDLITDGRYAKVVFTRDWKADSLRRDFTINALYADQQGKVIDYVGGLNDLRNRTIKFIGDAHHRI 160 (416)
Q Consensus 81 ~~~~~~~~~di~~~R~e~~~~~~~~~~~~~~~~~eDl~RRDFTINAla~~~~~~l~Dp~gG~~DL~~~~ir~v~~~~~rf 160 (416)
++..++..+||||+|+|.|++||+++++++++|++||.|||||||||||+++|+|+|||||++||++|+||+||+|++||
T Consensus 126 ~~~~~~~~~ei~~~r~e~~~~~~~~~~~~~~~~~~Dl~RRDFTINAma~~~~g~i~D~~~G~~DL~~~~ir~v~~~~~~f 205 (448)
T 1ou5_A 126 TARLHEENFEITTLRIDVTTDGRHAEVEFTTDWQKDAERRDLTINSMFLGFDGTLFDYFNGYEDLKNKKVRFVGHAKQRI 205 (448)
T ss_dssp EECTTTTCEEEEECCS------------SSCCSSCCGGGSSBGGGSCEECSSCBEECSSSHHHHTTTTCCCBSSTTTTTS
T ss_pred EEEECCEEEEEEEEEEEECCCCCCCCCCCCCCCHHHHHHCCCCEEEEEEECCCCEECCCCCHHHHHCCCEEECCCHHHHH
T ss_conf 99989979999999877325898886244777243442256412237881699883898987787478512437827865
Q ss_pred HCCCCCEEEEEEEEECCCCC--CCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCC
Q ss_conf 10421003320122013643--3111100012333321022205776887886421101899999875300233468870
Q gi|254781115|r 161 LEDYLRILRFFRFFAHYGEK--NIDSDGLVASIKAKKGLKILSSERIWSEINKLLEAKNPLNAIVHMYNGGIFKEIFLDV 238 (416)
Q Consensus 161 ~EDpLRiLRa~RFasrlg~f--~id~~t~~ai~~~~~~L~~iS~ERI~~El~KiL~~~~~~~~l~~L~~~gll~~ifpel 238 (416)
.|||||||||+||+|+||+. .++++|+.+|+++++.|..+|+||||+||.|||.+++|..++..|.++|+++.+||..
T Consensus 206 ~eDplRiLRa~RF~a~l~f~~~~~~~~t~~ai~~~~~~L~~lS~ERI~~El~KiL~~~~~~~~l~~L~e~gll~~i~~~~ 285 (448)
T 1ou5_A 206 QEDYLRILRYFRFYGRIVDKPGDHDPETLEAIAENAKGLAGISGERIWVELKKILVGNHVNHLIHLIYDLDVAPYIGLPA 285 (448)
T ss_dssp SSCTTHHHHHHHHHHHSCSSSSCCCHHHHHHHHHSCTTGGGSCSHHHHHHHHHHHTSTTHHHHHHHHHHTTCGGGGTCCC
T ss_pred HHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHCHHH
T ss_conf 43620899999998740010110208899999987643134788899999999975998899999999878777648166
Q ss_pred CCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCC--CCHHHHHHH
Q ss_conf 105857898778677631788016766652047768578998875303425677778888754114333--672466789
Q gi|254781115|r 239 QEISLDQLSQVIEAEQVFEWKIDSLLRFIVLISWQDKKSILSMAKKFSLPREIRYFLISFFNCNFNQKT--LSIPEIKKL 316 (416)
Q Consensus 239 ~~~~~~~l~~~~~~~~~~~~~~~~~lrla~Ll~~~~~~~~~~~~~rlkl~~~~~~~l~~~~~~~~~~~~--~~~~~~~~~ 316 (416)
.. +...+.+..... .....++++++++|+++.+ .+..++++|++|+++++.+..+...+..... .....++.+
T Consensus 286 ~~-~l~~~~~~~~~l--~~~~~~~~~~LaaLl~~~~--~~~~~~~rLklsk~~~~~i~~l~~~~~~l~~~~~~~~~~~~~ 360 (448)
T 1ou5_A 286 NA-SLEEFDKVSKNV--DGFSPKPVTLLASLFKVQD--DVTKLDLRLKIAKEEKNLGLFIVKNRKDLIKATDSSDPLKPY 360 (448)
T ss_dssp CS-CCHHHHHHHHHH--TTSCCCHHHHHGGGCCSTT--TTHHHHHHHCCCTTHHHHHHHHTTTTTTTSCCCSSSSTTHHH
T ss_pred HH-HHHHHHHHHHHH--HHCCCHHHHHHHHHHHHHH--HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
T ss_conf 75-799999999997--5158126678999975432--467899872167999999999999999998721304479999
Q ss_pred H---HHCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 9---8708024551698999864077760138999999987751288888988789996589877799999999999996
Q gi|254781115|r 317 F---YLYGDKVMIAKLKIFLALHYNNLTHQDTCFILQVLSDIIHWKKPLFPLTGDDVVKYGIPPGKKVGNILVHCKQEWI 393 (416)
Q Consensus 317 ~---~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~pI~G~dL~~~Gi~pGp~iG~iL~~l~~~~i 393 (416)
. ........ ......... .......++.+..|..|.+||+|+|||++|++|||++|++|++++++|+
T Consensus 361 ~~~~~~~~~~~~--~~~~~~l~~--------~~~~~~ll~~~~~~~~p~lpI~G~DLm~lGi~pGP~iG~iLk~L~~~wi 430 (448)
T 1ou5_A 361 QDFIIDSREPDA--TTRVCELLK--------YQGEHCLLKEMQQWSIPPFPVSGHDIRKVGISSGKEIGALLQQLREQWK 430 (448)
T ss_dssp HHHHHHCCSTTH--HHHHHHHHH--------HHTCHHHHHHHTTCCC---------------------------------
T ss_pred HHHHHHCCCCHH--HHHHHHHHH--------CCCHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHH
T ss_conf 999986035168--999999864--------5568999999971789999909999987879814899999999999999
Q ss_pred CCCCCCCHHHHHHHHHH
Q ss_conf 38888898999999999
Q gi|254781115|r 394 NSSFQLSQEDLHHLLRK 410 (416)
Q Consensus 394 ~~~~~n~~e~l~~~lk~ 410 (416)
++++++++|++++++|+
T Consensus 431 e~~~~~skeelL~~iKk 447 (448)
T 1ou5_A 431 KSGYQMEKDELLSYIKK 447 (448)
T ss_dssp -----------------
T ss_pred HCCCCCCHHHHHHHHCC
T ss_conf 78799999999998454