PSIBLAST alignment of GI: 254781115 and protein with PDB id: 1vfg

>gi|52696111|pdb|1VFG|A Chain A, Crystal Structure Of Trna Nucleotidyltransferase Complexed With A Primer Trna And An Incoming Atp Analog Length = 390
>gi|52696112|pdb|1VFG|B Chain B, Crystal Structure Of Trna Nucleotidyltransferase Complexed With A Primer Trna And An Incoming Atp Analog Length = 390
 Score =  131 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 69/383 (18%), Positives = 127/383 (33%), Gaps = 9/383 (2%)

Query: 18  ILSLLNKGEDKSCIVGGAVRDSLMNLSVQDIDIATTILPDRVMRIFSKTRYKVIPTSISY 77
           +  +  +   ++ IVGG VRD L+   V D+D         + +  ++     +     +
Sbjct: 2   VGQIAKEMGLRAYIVGGVVRDILLGKEVWDVDFVVEGNAIELAKELARRHGVNVHPFPEF 61

Query: 78  GTIKIICRKKYFDITTLRSDLITDGRYAKVVFTRDWKADSLRRDFTINALYADQQGKVID 137
           GT  +   K   +  T R +          V     K D +RRDFTINA+      +   
Sbjct: 62  GTAHLKIGKLKLEFATARRETYPRPGAYPKVEPASLKEDLIRRDFTINAMAISVNLEDYG 121

Query: 138 YVGGLNDLRNRTIKFIGD--AHHRILEDYLRILRFFRFFAHYGEKNIDSDGLVASIKAKK 195
            +             +         +ED +RILR  RF      K   S   +       
Sbjct: 122 TLIDYFGGLRDLKDKVIRVLHPVSFIEDPVRILRALRFAGRLNFKLSRSTEKLLKQAVNL 181

Query: 196 GLKILSSERIWSEINKLLEAKNPLNAIVHMYNGGIFKEIFLDVQEISLDQLSQVIEAEQV 255
           GL   +         KL   ++    I+ +Y      E  ++  + +   L ++    +V
Sbjct: 182 GLLKEAPRGRLINEIKLALREDRFLEILELYRKYRVLEEIIEGFQWNEKVLQKLYALRKV 241

Query: 256 FEWKI----DSLLRFIVLISWQDKKSILSMAKKFSLPREIRYFLISFFNCNFNQKTLSIP 311
            +W      +  + +  L       ++     K  L        +         K  S+ 
Sbjct: 242 VDWHALEFSEERIDYGWLYLLILISNLDYERGKHFLEEMSAPSWVRETYKFMKFKLGSLK 301

Query: 312 EIKKLFYLYGDKVMIAKLKIFLALHYNNLTHQDTCFILQVLSDIIHWKKPLFPLTGDDVV 371
           E  K      +   + K      L    L  +    I   L  +   K P   +  +++ 
Sbjct: 302 EELKKAKENYEVYRLLKPLHTSVLLLLMLEEELKEKIKLYLEKLRKVKLPKEKI--EELK 359

Query: 372 KYGIPPGKKVGNILVHCKQEWIN 394
           K G+  GK++G  +   K+E +N
Sbjct: 360 KQGLK-GKELGERIEELKREIMN 381