RPSBLAST alignment for GI: 254781115 and conserved domain: COG0617
>gnl|CDD|30962 COG0617, PcnB, tRNA nucleotidyltransferase/poly(A) polymerase [Translation, ribosomal structure and biogenesis]. Length = 412
Score = 219 bits (560), Expect = 9e-58
Identities = 113/410 (27%), Positives = 184/410 (44%), Gaps = 16/410 (3%)
Query: 9 WFHDSDLINILSLLNKGEDKSCIVGGAVRDSLMNLSVQDIDIATTILPDRVMRIFSKTRY 68
+ + +LS L + ++ +VGGAVRD L+ +D+DIAT P+ V ++F TR
Sbjct: 5 KDLSPNALKVLSKLKEAGYEAYLVGGAVRDLLLGRPPKDVDIATNATPEEVKKLFRNTR- 63
Query: 69 KVIPTSISYGTIKIICRKKYFDITTLRSD-LITDGRYAKVVFTRDWKADSLRRDFTINAL 127
P +GT+ + + ++TT R + +GR VVF + D RRDFTINAL
Sbjct: 64 ---PVGRKFGTVTVPFNGEIIEVTTFRKEGYGYNGRPLPVVFPGTLEEDLKRRDFTINAL 120
Query: 128 -YADQQGKVIDYVGGLNDLRNRTIKFIGDAHHRILEDYLRILRFFRFFAHYGEKNIDSDG 186
Y + G++ID GGL DL NR ++ IGDA R ED LRILR RF A G I+ +
Sbjct: 121 AYDPEDGEIIDPFGGLKDLENRVLRHIGDASERFREDPLRILRAARFAARLGFT-IEPET 179
Query: 187 LVASIKAKKGLKILSSERIWSEINKLLEAKNPLNAIVHMYNGGIFKEIF--LDVQEISLD 244
A L +S ER+W E+ KLL + NP A+ + G K +F LD
Sbjct: 180 EEAIRLMAPLLAKISRERLWDELKKLLLSPNPREALQLLREYGALKILFPELDKLFGVPK 239
Query: 245 QLSQVIEAEQVFEWKIDSLLRFIVLISWQDKKSILSMAKKFSLPREIRYFLISFFNCNFN 304
L + E E + D LL + + + ++ + I +
Sbjct: 240 LLLALREIELLLHNT-DELLLALAALLPAFLLAAATLPLLLRKGKTIAKKRRELKHDEAA 298
Query: 305 QKTLS--IPEIKKLFYLYGDKVMIAKLK--IFLALHYNNLTHQDTCFILQVLSDIIHWKK 360
K ++ + + + YL K ++ +++ A T + +L++L+ +
Sbjct: 299 AKAVNDLLKRLLRPNYLGYLKRLVEEVREIWHEAGELLPRTGKRARKLLRLLAFRAALEL 358
Query: 361 PLFPLTGDDVVKYGIPPGKKVGNILVHCKQEWINSSFQLSQEDLHHLLRK 410
+ + G PG K+G IL +++ + + +E L L +
Sbjct: 359 LILGRDLGEA--AGYKPGPKLGEILQLLEEKPLKGVIKNLKEALIERLER 406