RPSBLAST alignment for GI: 254781115 and conserved domain: COG0617

>gnl|CDD|30962 COG0617, PcnB, tRNA nucleotidyltransferase/poly(A) polymerase [Translation, ribosomal structure and biogenesis]. Length = 412
 Score =  219 bits (560), Expect = 9e-58
 Identities = 113/410 (27%), Positives = 184/410 (44%), Gaps = 16/410 (3%)

Query: 9   WFHDSDLINILSLLNKGEDKSCIVGGAVRDSLMNLSVQDIDIATTILPDRVMRIFSKTRY 68
                + + +LS L +   ++ +VGGAVRD L+    +D+DIAT   P+ V ++F  TR 
Sbjct: 5   KDLSPNALKVLSKLKEAGYEAYLVGGAVRDLLLGRPPKDVDIATNATPEEVKKLFRNTR- 63

Query: 69  KVIPTSISYGTIKIICRKKYFDITTLRSD-LITDGRYAKVVFTRDWKADSLRRDFTINAL 127
              P    +GT+ +    +  ++TT R +    +GR   VVF    + D  RRDFTINAL
Sbjct: 64  ---PVGRKFGTVTVPFNGEIIEVTTFRKEGYGYNGRPLPVVFPGTLEEDLKRRDFTINAL 120

Query: 128 -YADQQGKVIDYVGGLNDLRNRTIKFIGDAHHRILEDYLRILRFFRFFAHYGEKNIDSDG 186
            Y  + G++ID  GGL DL NR ++ IGDA  R  ED LRILR  RF A  G   I+ + 
Sbjct: 121 AYDPEDGEIIDPFGGLKDLENRVLRHIGDASERFREDPLRILRAARFAARLGFT-IEPET 179

Query: 187 LVASIKAKKGLKILSSERIWSEINKLLEAKNPLNAIVHMYNGGIFKEIF--LDVQEISLD 244
             A       L  +S ER+W E+ KLL + NP  A+  +   G  K +F  LD       
Sbjct: 180 EEAIRLMAPLLAKISRERLWDELKKLLLSPNPREALQLLREYGALKILFPELDKLFGVPK 239

Query: 245 QLSQVIEAEQVFEWKIDSLLRFIVLISWQDKKSILSMAKKFSLPREIRYFLISFFNCNFN 304
            L  + E E +     D LL  +  +      +  ++       + I        +    
Sbjct: 240 LLLALREIELLLHNT-DELLLALAALLPAFLLAAATLPLLLRKGKTIAKKRRELKHDEAA 298

Query: 305 QKTLS--IPEIKKLFYLYGDKVMIAKLK--IFLALHYNNLTHQDTCFILQVLSDIIHWKK 360
            K ++  +  + +  YL   K ++ +++     A      T +    +L++L+     + 
Sbjct: 299 AKAVNDLLKRLLRPNYLGYLKRLVEEVREIWHEAGELLPRTGKRARKLLRLLAFRAALEL 358

Query: 361 PLFPLTGDDVVKYGIPPGKKVGNILVHCKQEWINSSFQLSQEDLHHLLRK 410
            +      +    G  PG K+G IL   +++ +    +  +E L   L +
Sbjct: 359 LILGRDLGEA--AGYKPGPKLGEILQLLEEKPLKGVIKNLKEALIERLER 406