RPSBLAST alignment of GI: 254781115 and protein with PDBid: 1vfg
>1vfg_A A-adding enzyme, poly A polymerase; transferase, RNA, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: APC; 2.80A {Aquifex aeolicus} SCOP: a.173.1.1 d.218.1.4 Length = 390
Score = 128 bits (323), Expect = 2e-30
Identities = 83/388 (21%), Positives = 144/388 (37%), Gaps = 26/388 (6%)
Query: 28 KSCIVGGAVRDSLMNLSVQDIDIATTILPDRVMRIFSKTRYKVIPTSISYGTIKIICRKK 87
++ IVGG VRD L+ V D+D + + ++ + +GT + K
Sbjct: 12 RAYIVGGVVRDILLGKEVWDVDFVVEGNAIELAKELARRHGVNVHPFPEFGTAHLKIGKL 71
Query: 88 YFDITTLRSDLITDGRYAKVVFTRDWKADSLRRDFTINALY----ADQQGKVIDYVGGLN 143
+ T R + V K D +RRDFTINA+ + G +IDY GGL
Sbjct: 72 KLEFATARRETYPRPGAYPKVEPASLKEDLIRRDFTINAMAISVNLEDYGTLIDYFGGLR 131
Query: 144 DLRNRTIKFIGDAHHRILEDYLRILRFFRFFAHYGEKNID-SDGLVASIKAKKGLKILSS 202
DL+++ I+ +ED +RILR RF K ++ L+ LK
Sbjct: 132 DLKDKVIRV--LHPVSFIEDPVRILRALRFAGRLNFKLSRSTEKLLKQAVNLGLLKEAPR 189
Query: 203 ERIWSEINKLLEAKNPLNAIVHMYNGGIFKEIFLDVQEIS--------LDQLSQVIEAEQ 254
R+ +EI L L + + +EI Q L ++ E
Sbjct: 190 GRLINEIKLALREDRFLEILELYRKYRVLEEIIEGFQWNEKVLQKLYALRKVVDWHALEF 249
Query: 255 VFEWKIDSLLRFIVLISWQDKKSILSMAKKFSLPREIRYFLISFFNCNFNQKTLSIPEIK 314
E L ++LIS D + ++ S P +R + +K
Sbjct: 250 SEERIDYGWLYLLILISNLDYERGKHFLEEMSAPSWVRETY--------KFMKFKLGSLK 301
Query: 315 KLFYLYGDKVMIAKLKIFLALHYNNLTHQDTCFILQVLSDIIHWKKPLFPLT-GDDVVKY 373
+ + + +L L L + ++ + +K P +++ K
Sbjct: 302 EELKKAKENYEVYRLLKPLHTSVLLLLMLEEELKEKIKLYLEKLRKVKLPKEKIEELKKQ 361
Query: 374 GIPPGKKVGNILVHCKQEWINSSFQLSQ 401
G+ GK++G + K+E +N +L+
Sbjct: 362 GL-KGKELGERIEELKREIMN-KIKLAA 387