RPSBLAST alignment of GI: 254781115 and protein with PDBid: 1vfg

>1vfg_A A-adding enzyme, poly A polymerase; transferase, RNA, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: APC; 2.80A {Aquifex aeolicus} SCOP: a.173.1.1 d.218.1.4 Length = 390
 Score =  128 bits (323), Expect = 2e-30
 Identities = 83/388 (21%), Positives = 144/388 (37%), Gaps = 26/388 (6%)

Query: 28  KSCIVGGAVRDSLMNLSVQDIDIATTILPDRVMRIFSKTRYKVIPTSISYGTIKIICRKK 87
           ++ IVGG VRD L+   V D+D         + +  ++     +     +GT  +   K 
Sbjct: 12  RAYIVGGVVRDILLGKEVWDVDFVVEGNAIELAKELARRHGVNVHPFPEFGTAHLKIGKL 71

Query: 88  YFDITTLRSDLITDGRYAKVVFTRDWKADSLRRDFTINALY----ADQQGKVIDYVGGLN 143
             +  T R +          V     K D +RRDFTINA+      +  G +IDY GGL 
Sbjct: 72  KLEFATARRETYPRPGAYPKVEPASLKEDLIRRDFTINAMAISVNLEDYGTLIDYFGGLR 131

Query: 144 DLRNRTIKFIGDAHHRILEDYLRILRFFRFFAHYGEKNID-SDGLVASIKAKKGLKILSS 202
           DL+++ I+         +ED +RILR  RF      K    ++ L+        LK    
Sbjct: 132 DLKDKVIRV--LHPVSFIEDPVRILRALRFAGRLNFKLSRSTEKLLKQAVNLGLLKEAPR 189

Query: 203 ERIWSEINKLLEAKNPLNAIVHMYNGGIFKEIFLDVQEIS--------LDQLSQVIEAEQ 254
            R+ +EI   L     L  +       + +EI    Q           L ++      E 
Sbjct: 190 GRLINEIKLALREDRFLEILELYRKYRVLEEIIEGFQWNEKVLQKLYALRKVVDWHALEF 249

Query: 255 VFEWKIDSLLRFIVLISWQDKKSILSMAKKFSLPREIRYFLISFFNCNFNQKTLSIPEIK 314
             E      L  ++LIS  D +      ++ S P  +R                 +  +K
Sbjct: 250 SEERIDYGWLYLLILISNLDYERGKHFLEEMSAPSWVRETY--------KFMKFKLGSLK 301

Query: 315 KLFYLYGDKVMIAKLKIFLALHYNNLTHQDTCFILQVLSDIIHWKKPLFPLT-GDDVVKY 373
           +      +   + +L   L      L   +     ++   +   +K   P    +++ K 
Sbjct: 302 EELKKAKENYEVYRLLKPLHTSVLLLLMLEEELKEKIKLYLEKLRKVKLPKEKIEELKKQ 361

Query: 374 GIPPGKKVGNILVHCKQEWINSSFQLSQ 401
           G+  GK++G  +   K+E +N   +L+ 
Sbjct: 362 GL-KGKELGERIEELKREIMN-KIKLAA 387