RPSBLAST alignment of GI: 254781115 and SCOP domain: d1vfga2

Alignment

 Score = 88.0 bits (217), Expect = 1e-18
 Identities = 36/125 (28%), Positives = 55/125 (44%), Gaps = 4/125 (3%)

Query: 28  KSCIVGGAVRDSLMNLSVQDIDIATTILPDRVMRIFSKTRYKVIPTSISYGTIKIICRKK 87
           ++ IVGG VRD L+   V D+D         + +  ++     +     +GT  +   K 
Sbjct: 12  RAYIVGGVVRDILLGKEVWDVDFVVEGNAIELAKELARRHGVNVHPFPEFGTAHLKIGKL 71

Query: 88  YFDITTLRSDLITDGRYAKVVFTRDWKADSLRRDFTINALYAD----QQGKVIDYVGGLN 143
             +  T R +          V     K D +RRDFTINA+         G +IDY GGL 
Sbjct: 72  KLEFATARRETYPRPGAYPKVEPASLKEDLIRRDFTINAMAISVNLEDYGTLIDYFGGLR 131

Query: 144 DLRNR 148
           DL+++
Sbjct: 132 DLKDK 136

SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Nucleotidyltransferase
superfamily: Nucleotidyltransferase
family: Poly A polymerase head domain-like
domain: Poly A polymerase PcnB
species: Aquifex aeolicus [TaxId: 63363]