HHsearch alignment for GI: 254781118 and conserved domain: CHL00201

Probab=98.90  E-value=1.9e-09  Score=80.02  Aligned_cols=100  Identities=15%  Similarity=0.242  Sum_probs=64.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCCCCCCC------CCCCCC----CCEEEEECCCCCCCCCCCH--HHHHHHHHHHCC-
Q ss_conf             788999999998738553454311565323------566655----4203641222225432100--122344442102-
Q gi|254781118|r  176 FQQRSLLISQIRHFMEKKGFMEVETPILQP------IYGGAT----ADPFKTHHNILKADMYLRI--APELYLKRVLIS-  242 (502)
Q Consensus       176 l~~Rs~i~~~iR~~l~~~gF~EveTP~L~~------~~~g~~----~~~F~~~~~~~~~~~yL~q--Spql~~k~l~~~-  242 (502)
T Consensus        18 ~~~~~~i~~~i~~~f~~~Gf~~I~TP~lE~~e~~~~~~g~~~d~i~k~~y~f~-D~~g~~l~LRpD~T~pi--aR~~~~~   94 (424)
T CHL00201         18 IEYWQFIHEKAATLLKLANYQEIRTPIFENTELFDRGIGEETDIVNKEMYRFF-DRGNRSITLRPEGTASI--VRAFIEN   94 (424)
T ss_pred             HHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHCCCCCCCCHHHHHHHEEEE-CCCCCEEEECCCCHHHH--HHHHHHC
T ss_conf             99999999999999998599250475404198862357874205666532545-59998888678770999--9999974


Q ss_pred             ---C--CCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             ---4--30245434532025423443245210001001100
Q gi|254781118|r  243 ---G--LTDQVFELNRNFRNEGVSSRHNPEFTMIEAYWAYT  278 (502)
Q Consensus       243 ---G--~~drvfeI~~~FR~E~~~~~H~pEFt~lE~e~a~~  278 (502)
T Consensus        95 ~~~~~~~P~r~~y~g~vfR~e~pq~GR~REF~Q~gvEiiG~  135 (424)
T CHL00201         95 RMAYHMRPQRLWYSGPMFRYERPQSGRQRQFHQLGIEFIGS  135 (424)
T ss_pred             CCCCCCCCEEEEEECCEEECCCCCCCCCCHHHHCCEEEECC
T ss_conf             76557998789987547805898788642104146200068