HHsearch alignment for GI: 254781118 and conserved domain: COG0124
>COG0124 HisS Histidyl-tRNA synthetase [Translation, ribosomal structure and biogenesis].
Probab=98.92 E-value=5.9e-09 Score=76.87 Aligned_cols=103 Identities=22% Similarity=0.240 Sum_probs=66.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCC------CCCCCCCC----CCEEEEECCCCCCCCCCCH---HHH--HHHHHHH
Q ss_conf 7889999999987385534543115653------23566655----4203641222225432100---122--3444421
Q gi|254781118|r 176 FQQRSLLISQIRHFMEKKGFMEVETPIL------QPIYGGAT----ADPFKTHHNILKADMYLRI---APE--LYLKRVL 240 (502)
Q Consensus 176 l~~Rs~i~~~iR~~l~~~gF~EveTP~L------~~~~~g~~----~~~F~~~~~~~~~~~yL~q---Spq--l~~k~l~ 240 (502)
T Consensus 18 ~~~~~~i~~~~~~v~~~yGf~eI~TPifE~telf~r~~Ge~td~v~kemY~F~-Dkggr~laLRpe~Tapv~R~~~en~~ 96 (429)
T COG0124 18 MALREYIESTIRKVFESYGFSEIRTPIFEYTELFARKSGEETDVVEKEMYTFK-DKGGRSLALRPELTAPVARAVAENKL 96 (429)
T ss_pred HHHHHHHHHHHHHHHHHCCCEECCCCCCCCHHHHHHCCCCCCCCCCCCEEEEE-ECCCCEEEECCCCCHHHHHHHHHCCC
T ss_conf 89999999999999998099765575511166762016974333321028999-48998898446674999999995622
Q ss_pred CCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 024302454345320254234432452100010011000
Q gi|254781118|r 241 ISGLTDQVFELNRNFRNEGVSSRHNPEFTMIEAYWAYTD 279 (502)
Q Consensus 241 ~~G~~drvfeI~~~FR~E~~~~~H~pEFt~lE~e~a~~d 279 (502)
T Consensus 97 ~~~~p~k~yy~g~vfRyErPQ~GR~RqF~Q~g~E~iG~~ 135 (429)
T COG0124 97 DLPKPLKLYYFGPVFRYERPQKGRYRQFYQFGVEVIGSD 135 (429)
T ss_pred CCCCCEEEEEECCEECCCCCCCCCCEEEEECCEEEECCC
T ss_conf 036872599833562378888887503687676776799