HHsearch alignment for GI: 254781118 and conserved domain: COG2502
>COG2502 AsnA Asparagine synthetase A [Amino acid transport and metabolism].
Probab=98.10 E-value=5.2e-05 Score=51.49 Aligned_cols=269 Identities=16% Similarity=0.225 Sum_probs=133.8
Q ss_pred HHHHHHHHHHHH-HHHHHHHCCCCCCCCCCC------CCCCEEEEECCCCCCC-CCCCHHHHHHHHHHHCC-CC--CHHH
Q ss_conf 999999987385-534543115653235666------5542036412222254-32100122344442102-43--0245
Q gi|254781118|r 180 SLLISQIRHFME-KKGFMEVETPILQPIYGG------ATADPFKTHHNILKAD-MYLRIAPELYLKRVLIS-GL--TDQV 248 (502)
Q Consensus 180 s~i~~~iR~~l~-~~gF~EveTP~L~~~~~g------~~~~~F~~~~~~~~~~-~yL~qSpql~~k~l~~~-G~--~drv 248 (502)
T Consensus 13 sfvKn~Ft~~l~~~L~lieVq~Pils~vg~G~qDnLsg~ekaVsv~vk~~p~a~fEvVhSLAKWKR~tL~r~~f~~~eGl 92 (330)
T COG2502 13 SFVKNTFTQHLEERLGLIEVQAPILSRVGDGLQDNLSGTEKAVSVKVKKLPDATFEVVHSLAKWKRHTLARYGFSAGEGL 92 (330)
T ss_pred HHHHHHHHHHHHHHCCEEEEECCEEECCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCE
T ss_conf 99999999999986496886145175057754455557514358887536873446768889998888986387678724
Q ss_pred HHHHHHHC-CCC-CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC---CCCCCCEEECCCCCCCEEEEE
Q ss_conf 43453202-542-3443245210001001100011124567899998899870886---131175341133221000000
Q gi|254781118|r 249 FELNRNFR-NEG-VSSRHNPEFTMIEAYWAYTDYRDMMKLVEDLCHNLAKTLHGTT---DIPFGEKVISFKAPFACKSML 323 (502)
Q Consensus 249 feI~~~FR-~E~-~~~~H~pEFt~lE~e~a~~d~~dim~l~E~li~~i~~~~~~~~---~~~~~~~~~d~~~~f~~~~~~ 323 (502)
T Consensus 93 ythM~AlRpDeD~ld~~HSvYVDQWDWEkvi~~g~rNl~yLK~tV~kIY~~ir~te~av~~~~~~~~-~LP~~ItFihse 171 (330)
T COG2502 93 YTHMKALRPDEDRLDPIHSVYVDQWDWEKVIPDGDRNLAYLKSTVEKIYAAIRETELAVSAEFGLAP-FLPDQITFIHSQ 171 (330)
T ss_pred EEECCCCCCCCCCCCCHHEEEECCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC-CCCCCEEEEEHH
T ss_conf 6521103787334453022785211364425875403799999999999999999999986528764-587615796369
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHEECCEEEEC--------CCHHHH-HHHC
Q ss_conf 0233448862154332167776565202354332231899988765213010105435655--------800234-5303
Q gi|254781118|r 324 QLVKEATGLDFMLLKSDQEARVAAQSIGITVENDALWGEVMMTIFEEKIEKNIVNPTHITD--------FPKDIS-PFAK 394 (502)
Q Consensus 324 e~i~~~~g~~~~~~~~~e~~~~~~~~~g~~~~~~~~~g~l~~~~~e~~ie~~~~~p~fI~d--------fP~~~~-Pf~~ 394 (502)
T Consensus 172 eL~~ry-----P~L~~k~RE~ai~Ke~g---------------------------AvFligIGg~LsdG~~hd~RaPdYD 219 (330)
T COG2502 172 ELVARY-----PDLDPKGRERAIAKELG---------------------------AVFLIGIGGKLSDGKPHDVRAPDYD 219 (330)
T ss_pred HHHHHC-----CCCCCCHHHHHHHHHHC---------------------------CEEEEECCCCCCCCCCCCCCCCCCC
T ss_conf 999768-----89993024678998638---------------------------3899841650699995778899865
Q ss_pred ----CCC-----CCHHHEEECCEEECCEEEEECHHEECCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCC
Q ss_conf ----579-----67211011135555787200211005799999999999988730573354508999997608698461
Q gi|254781118|r 395 ----EVA-----GEKRLVERFETYCNGWEICNAFSELNDPVEQRIRMEQQVEQSHQRGEHTILDEDFLDAMTYGMPPASG 465 (502)
Q Consensus 395 ----~~~-----~~~~~~~~fdl~~~G~Ei~~G~~e~~dp~~q~~r~~~~~~~~~~~~~~~~~~~~yl~a~~yG~PPhgG 465 (502)
T Consensus 220 dWtt~se~~~~gLNGDilvwn~~l~~afElSSMGIRVde~-----~l~~Ql~ltg--deDrl~~~wHq~llng~lP~TIG 292 (330)
T COG2502 220 DWTTPSELGYKGLNGDILVWNPVLGDAFELSSMGIRVDED-----ALKRQLALTG--DEDRLELEWHQMLLNGELPQTIG 292 (330)
T ss_pred CCCCCCCCCCCCCCCCEEEECHHCCCCEEEECCEEEECHH-----HHHHHHHCCC--CHHHHCCHHHHHHHCCCCCCCCC
T ss_conf 5778553454666775798520014110221240466589-----9999985268--63543076999997397771104
Q ss_pred EECCHHHHHHHHCCCCCCEECCC
Q ss_conf 32468999899826288404127
Q gi|254781118|r 466 LGLGIDRLIMLLTNAPSIRDVIL 488 (502)
Q Consensus 466 ~glGldRL~m~l~g~~~IRdvi~ 488 (502)
T Consensus 293 GGIGQSRl~M~lL~k~HIGeVQ~ 315 (330)
T COG2502 293 GGIGQSRLCMLLLQKKHIGEVQA 315 (330)
T ss_pred CCCCHHHHHHHHHCCCCCCEEEE
T ss_conf 75018899999961232241551