RPSBLAST alignment for GI: 254781118 and conserved domain: TIGR00458
>gnl|CDD|129550 TIGR00458, aspS_arch, aspartyl-tRNA synthetase, archaeal type. In a multiple sequence alignment of representative asparaginyl-tRNA synthetases (asnS), archaeal/eukaryotic type aspartyl-tRNA synthetases (aspS_arch), and bacterial type aspartyl-tRNA synthetases (aspS_bact), there is a striking similarity between asnS and aspS_arch in gap pattern and in sequence, and a striking divergence of aspS_bact. Consequently, a separate model was built for each of the three groups. This model, aspS_arch, represents aspartyl-tRNA synthetases from the eukaryotic cytosol and from the Archaea. In some species, this enzyme aminoacylates tRNA for both Asp and Asn; Asp-tRNA(asn) is subsequently transamidated to Asn-tRNA(asn). Length = 428
Score = 130 bits (328), Expect = 8e-31
Identities = 114/452 (25%), Positives = 204/452 (45%), Gaps = 52/452 (11%)
Query: 57 EKSQDMITVAGRVYSSRNSG--MFMDIHDASGKIQIFTHKDTADQDSQNLLSMIDIGDII 114
E +T G V+ R+ G +F+ + D G IQI ++ +++ ++
Sbjct: 9 EMDGQEVTFMGWVHEIRDLGGLIFVLLRDREGLIQITAPAKKVSKNLFKWAKKLNLESVV 68
Query: 115 GITGQVRRTKR--GELTVNAQKIIMLSKALNSIPETYYGLSDVEI--RYRKRYLDIISNS 170
+ G V+ ++ G + KI ++++A +P E+ R R+LD+ +
Sbjct: 69 AVRGIVKIKEKAPGGFEIIPTKIEVINEAKEPLPLDPTEKVPAELDTRLDYRFLDLRRPT 128
Query: 171 DSKIRFQQRSLLISQIRHFMEKKGFMEVETPIL--QPIYGGATADPFKTHHNILKADMYL 228
I F+ RS ++ +R F+ ++GF+EV TP L GG P + + +L
Sbjct: 129 VQAI-FRIRSGVLESVREFLAEEGFIEVHTPKLVASATEGGTELFPI----TYFEREAFL 183
Query: 229 RIAPELYLKRVLISGLTDQVFELNRNFRNEGVSS-RHNPEFTMIEAYWAYTDYRDMMKLV 287
+P+LY K+ L++ ++V+E+ FR E ++ RH E T I+ A+ D+ D+M ++
Sbjct: 184 GQSPQLY-KQQLMAAGFERVYEIGPIFRAEEHNTHRHLNEATSIDIEMAFEDHHDVMDIL 242
Query: 288 EDLCHNLAKTLHGTTDIPFGEKVISFKAPFACKSMLQLVKEATGLDFMLLKSDQEARVAA 347
E+L + + + + P F+ L D EA A
Sbjct: 243 EELVVRVFEDVPERCAHQLETLEFKLEKP--------------EGKFVRLTYD-EAIEMA 287
Query: 348 QSIGITVENDALWGEVMMTIFEEKIEKNIVNPTHITDFPKDISPFAKEVAGEKRLVERFE 407
+ G+ + WGE + T E+ + + + ITD+P +I PF + E
Sbjct: 288 NAKGVEIG----WGEDLSTEAEKALGEEMDGLYFITDWPTEIRPFYT-MPDEDNP----- 337
Query: 408 TYCNGWEICNAFSELNDPVE-----QRIRM-EQQVEQSHQRGEHTILDEDFLDAMTYGMP 461
EI +F + +E QRI + + VE+ +G + +D+L+A +YGMP
Sbjct: 338 ------EISKSFDLMYRDLEISSGAQRIHLHDLLVERIKAKGLNPEGFKDYLEAFSYGMP 391
Query: 462 PASGLGLGIDRLIMLLTNAPSIRDVILFPAQR 493
P +G GLG +R +M L +IR+ +LFP R
Sbjct: 392 PHAGWGLGAERFVMFLLGLKNIREAVLFPRDR 423