>gnl|CDD|129551 TIGR00459, aspS_bact, aspartyl-tRNA synthetase, bacterial type. In a multiple sequence alignment of representative asparaginyl-tRNA synthetases (asnS), archaeal/eukaryotic type aspartyl-tRNA synthetases (aspS_arch), and bacterial type aspartyl-tRNA synthetases (aspS_bact), there is a striking similarity between asnS and aspS_arch in gap pattern and in sequence, and a striking divergence of aspS_bact. Consequently, a separate model was built for each of the three groups. This model, aspS_bact, represents aspartyl-tRNA synthetases from the Bacteria and from mitochondria. In some species, this enzyme aminoacylates tRNA for both Asp and Asn; Asp-tRNA(asn) is subsequently transamidated to Asn-tRNA(asn). This model generates very low scores for the archaeal type of aspS and for asnS; scores between the trusted and noise cutoffs represent fragmentary sequences. Length = 583

 Score = 74.0 bits (182), Expect = 8e-14
 Identities = 43/124 (34%), Positives = 63/124 (50%), Gaps = 5/124 (4%)

Query: 368 FEEKIEKNIVNPTHITDFPKDISPFAKEVAGEKRLVERFETYCNGWEICNAFSELNDP-V 426
           FE+  E  +    H    PKD      E A E+ L E ++   NG E+      ++DP V
Sbjct: 432 FEKDKEGRLCAAHHPFTMPKDEDLENLEAAPEEALAEAYDLVLNGVELGGGSIRIHDPEV 491

Query: 427 EQRIRMEQQVEQSHQRGEHTILDEDFLDAMTYGMPPASGLGLGIDRLIMLLTNAPSIRDV 486
           ++++     ++    R +   L    L+A  YG PP +G  LG+DRL+MLLT   +IRDV
Sbjct: 492 QKKVFEILGIDPEEAREKFGFL----LEAFKYGTPPHAGFALGLDRLMMLLTGTDNIRDV 547

Query: 487 ILFP 490
           I FP
Sbjct: 548 IAFP 551