RPSBLAST alignment for GI: 254781118 and conserved domain: TIGR00462
>gnl|CDD|161889 TIGR00462, genX, lysyl-tRNA synthetase-like protein GenX. Many Gram-negative bacteria have a protein closely homologous to the C-terminal region of lysyl-tRNA synthetase (LysS). Multiple sequence alignment of these proteins with the homologous regions of collected LysS proteins shows that these proteins form a distinct set rather than just similar truncations of LysS. The protein is termed GenX after its designation in E. coli. Interestingly, genX often is located near a homolog of lysine-2,3-aminomutase. Its function is unknown. Length = 304
Score = 253 bits (649), Expect = 6e-68
Identities = 109/322 (33%), Positives = 157/322 (48%), Gaps = 28/322 (8%)
Query: 177 QQRSLLISQIRHFMEKKGFMEVETPILQPIYGGATA---DPFKTH---HNILKADMYLRI 230
+ R+ L++ IR F ++G +EVETP+L P T D F T + +YL+
Sbjct: 2 RARARLLAAIRAFFAERGVLEVETPLLSP--APVTDPHLDAFATEFLGPDGEGRPLYLQT 59
Query: 231 APELYLKRVLISGLTDQVFELNRNFRNEGVSSRHNPEFTMIEAYWAYTDYRDMMKLVEDL 290
+PE +KR+L +G +F++ + FRN RHNPEFTM+E Y DY D+M VE L
Sbjct: 60 SPEYAMKRLLAAGSGP-IFQICKVFRNGERGRRHNPEFTMLEWYRPGFDYHDLMDEVEAL 118
Query: 291 CHNLAKTLHGTTDIPFGEKVISFKAPFACKSMLQLVKEATGLDFMLLKSDQEARVAAQSI 350
L AP+ S + G+D L S E AA +
Sbjct: 119 LQELLGDP---------------FAPWERLSYQEAFLRYAGID-PLTASLDELAAAAAAH 162
Query: 351 GITVENDALWGEVMMTIFEEKIEKNIVN--PTHITDFPKDISPFAKEVAGEKRLVERFET 408
G+ + +++ +F EK+E ++ PT + D+P + A+ + R+ ERFE
Sbjct: 163 GVRASEEDDRDDLLDLLFSEKVEPHLGFGRPTFLYDYPASQAALARISPDDPRVAERFEL 222
Query: 409 YCNGWEICNAFSELNDPVEQRIRMEQQVEQSHQRGEHTI-LDEDFLDAMTYGMPPASGLG 467
Y G E+ N F EL D EQR R E + G LDE FL A+ G+P SG+
Sbjct: 223 YIKGLELANGFHELTDAAEQRRRFEADNAERKALGLPRYPLDERFLAALEAGLPECSGVA 282
Query: 468 LGIDRLIMLLTNAPSIRDVILF 489
LG+DRL+ML A SI DV+ F
Sbjct: 283 LGVDRLLMLALGADSIDDVLAF 304