HHsearch alignment for GI: 254781120 and conserved domain: COG1060
>COG1060 ThiH Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes [Coenzyme metabolism / General function prediction only].
Probab=91.98 E-value=1.3 Score=25.61 Aligned_cols=213 Identities=18% Similarity=0.181 Sum_probs=103.3
Q ss_pred EEEEECCCCCCCEEEEEECCCCHHCCCCCCCCCCH---HHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
Q ss_conf 54430234677338988406510048613224411---102789899999999999972220344443434445458611
Q gi|254781120|r 103 IETVYIPEKSRGTLCVSSQVGCSLTCSFCYTGTQK---LVRNLTAEEILLQVLLARSLLGDFPGCEDIEGMVIPSVGRKI 179 (384)
Q Consensus 103 IEsVlip~~~r~T~CvSSQvGC~m~C~FCaTg~~G---~~RNLt~~EIv~Qv~~~~~~l~~~~~~~~~~~~~~~~~~~~i 179 (384)
T Consensus 58 v~n~~in~TN---~-------C~~~C~fCaF~~~~~~~~~y~Ls~eeI~~~~~~~~~~--------------------G~ 107 (370)
T COG1060 58 VVNRNINYTN---I-------CVNDCTFCAFYRKPGDPKAYTLSPEEILEEVREAVKR--------------------GI 107 (370)
T ss_pred EEEECCCCCH---H-------HCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC--------------------CC
T ss_conf 9752578532---3-------3179972623457888655316999999999999875--------------------98
Q ss_pred CEEEEECCCCHHHH---HHHHHHHHHC-CCC-------CCCCCCCCCEEEEEECCCCHHHHHHHC---C-CCCCEEEEEE
Q ss_conf 01441014544542---8999999603-768-------457787753688851387414788601---2-5651799840
Q gi|254781120|r 180 SNIVMMGMGEPLCN---FDNVKKSLSI-ASD-------SMGLSFSKRRITLSTSGFVPNIARVGE---E-IGVMLAISLH 244 (384)
Q Consensus 180 ~NiVfMGmGEPl~N---~d~v~~ai~~-l~~-------~~g~~~~~r~ITvST~Gi~p~I~~la~---~-~~~~LAiSLh 244 (384)
T Consensus 108 ~Evli~gG~~p~~~~~y~~~~~~~ik~~~p~~~i~a~s~~ei~~~~~~~~~s~---~E~l~~Lk~aGldsmpg~~ae-i- 182 (370)
T COG1060 108 TEVLIVGGEHPELSLEYYEELFRTIKEEFPDLHIHALSAGEILFLAREGGLSY---EEVLKRLKEAGLDSMPGGGAE-I- 182 (370)
T ss_pred EEEEEECCCCCCCCHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHCCCCCH---HHHHHHHHHCCCCCCCCCCEE-E-
T ss_conf 69998057687743679999999998857303430167888679874368889---999999997698767475411-4-
Q ss_pred CCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEECC--CCC
Q ss_conf 455113444123312578999999999998625894599999872699988899999999832545316675127--788
Q gi|254781120|r 245 AVSNDLRNILVPINRKYPLEMLIDACRHYPGLSNARRITFEYVMLKGINDSPRDALNLIKILKGIPAKINLIPFN--PWP 322 (384)
Q Consensus 245 a~~~~~R~~lmPi~~~~~l~~l~~a~~~y~~~~~~rrit~EYvli~gvNDs~e~a~~L~~ll~~~~~~vNLIp~N--~~~ 322 (384)
T Consensus 183 -l~e~vr~~~~p--~K~~~~~wle~~~~Ah~lGI~~tatml~Gh~E~~ed~~~hl~~ir~lQ~~~gg~~~fI~~~f~p~~ 259 (370)
T COG1060 183 -LSEEVRKIHCP--PKKSPEEWLEIHERAHRLGIPTTATMLLGHVETREDRIDHLEHIRDLQDETGGFQEFIPLRFRPEN 259 (370)
T ss_pred -CHHHHHHHHCC--CCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCC
T ss_conf -16779986379--889999999999999976998420347873288899999999999999985895799805545788
Q ss_pred CC----CC-CCCCHHHHHHHHHHHHHCCCEEEECCC
Q ss_conf 79----88-688989999999999987987854158
Q gi|254781120|r 323 GC----EY-LCSDQKDIVTFSECIKRSGYSSPIRTP 353 (384)
Q Consensus 323 ~~----~~-~~~~~~~i~~F~~~L~~~Gi~~tiR~s 353 (384)
T Consensus 260 ~~~~~~~~~~~~~~~~l~~iAiaRi~l~~~i~~~~a 295 (370)
T COG1060 260 GPLPAEVVPEASLEQDLKAIALARIFLDNNISNIQA 295 (370)
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf 876666789899899999999999970676542417