HHsearch alignment for GI: 254781120 and conserved domain: PRK05301
>PRK05301 pyrroloquinoline quinone biosynthesis protein PqqE; Provisional.
Probab=98.80 E-value=4.8e-07 Score=73.19 Aligned_cols=185 Identities=18% Similarity=0.280 Sum_probs=117.6
Q ss_pred CCCHHCCCCCCCCCC--HHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHH
Q ss_conf 651004861322441--110278989999999999997222034444343444545861101441014544542899999
Q gi|254781120|r 122 VGCSLTCSFCYTGTQ--KLVRNLTAEEILLQVLLARSLLGDFPGCEDIEGMVIPSVGRKISNIVMMGMGEPLCNFDNVKK 199 (384)
Q Consensus 122 vGC~m~C~FCaTg~~--G~~RNLt~~EIv~Qv~~~~~~l~~~~~~~~~~~~~~~~~~~~i~NiVfMGmGEPl~N~d~v~~ 199 (384)
T Consensus 25 ~~CNL~C~hCy~~~~~~~~~~ELs~~e~~~~id~l~~~------------------G--v~~v~~tG-GEPllr~D-~~e 82 (375)
T PRK05301 25 YRCPLQCPYCSNPLDLARHGAELSTAEWIRVLREARAL------------------G--VLQLHFSG-GEPLLRKD-LEE 82 (375)
T ss_pred CHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC------------------C--CCEEEECC-CCCCCCCC-HHH
T ss_conf 40078784669850048765789999999999999986------------------9--98899618-65245668-999
Q ss_pred HHHCCCCCCCCCCCCCEEEEEECCCC--HH-HHHHHCCCCCCEEEEEECCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 96037684577877536888513874--14-7886012565179984045511344412331257899999999999862
Q gi|254781120|r 200 SLSIASDSMGLSFSKRRITLSTSGFV--PN-IARVGEEIGVMLAISLHAVSNDLRNILVPINRKYPLEMLIDACRHYPGL 276 (384)
Q Consensus 200 ai~~l~~~~g~~~~~r~ITvST~Gi~--p~-I~~la~~~~~~LAiSLha~~~~~R~~lmPi~~~~~l~~l~~a~~~y~~~ 276 (384)
T Consensus 83 i~~~a~-~~G~-----~~~l~TNG~lit~~~a~~L~~~gl~~v~vSlDg~~~e~hD~~rG~--~G~f~~~~~~i~~l~-~ 153 (375)
T PRK05301 83 LVAHAR-RLGL-----YTNLITSGVGLTEARLAALKAAGLDHIQLSFQDSDPELADRIAGT--RGAFAQKLEVARLVK-A 153 (375)
T ss_pred HHHHHH-HCCC-----EEEEEECCCCCCHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCC--CCHHHHHHHHHHHHH-H
T ss_conf 999999-7697-----589960674557999999985099889995677987787776378--862999999999999-7
Q ss_pred CCCCEEEEEEEEECCCCCCHHHHHHHHHHHCCCCCE-EEEEECCCC----CCCCCCCCCHHHHHHHHHHH
Q ss_conf 589459999987269998889999999983254531-667512778----87988688989999999999
Q gi|254781120|r 277 SNARRITFEYVMLKGINDSPRDALNLIKILKGIPAK-INLIPFNPW----PGCEYLCSDQKDIVTFSECI 341 (384)
Q Consensus 277 ~~~rrit~EYvli~gvNDs~e~a~~L~~ll~~~~~~-vNLIp~N~~----~~~~~~~~~~~~i~~F~~~L 341 (384)
T Consensus 154 ~-Gi~v~i~~ti~r~-N--~~~l~~i~~la~~lGv~~~~l~~~~~~Gr~~~~r~~L~pt~e~~~~~~~~~ 219 (375)
T PRK05301 154 H-GYPLTLNAVIHRH-N--IDQIPRIIELAVELGADRLELANTQYYGWALLNRAALMPTREQLERAERIV 219 (375)
T ss_pred C-CCCEEEEEEECCC-C--HHHHHHHHHHHHHCCCCEEEEEEEEEECCHHCCHHHHCCCHHHHHHHHHHH
T ss_conf 4-9816999872305-6--888999999999729982898765675102116665379999999999999