HHsearch results for GI: 254781120 and protein with PDBid: 3c8f_A
>3c8f_A Pyruvate formate-lyase 1-activating enzyme; adoMet radical, SAM radical, activase, glycyl radical, 4Fe- 4S, carbohydrate metabolism, cytoplasm; HET: MT2 PGE; 2.25A {Escherichia coli} PDB: 3cb8_A*
Probab=99.87 E-value=5.1e-20 Score=167.64 Aligned_cols=205 Identities=19% Similarity=0.326 Sum_probs=159.3
Q ss_pred CCEEEEEECCCCHHCCCCCC---CCCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCC
Q ss_conf 73389884065100486132---244111027898999999999999722203444434344454586110144101454
Q gi|254781120|r 113 RGTLCVSSQVGCSLTCSFCY---TGTQKLVRNLTAEEILLQVLLARSLLGDFPGCEDIEGMVIPSVGRKISNIVMMGMGE 189 (384)
Q Consensus 113 r~T~CvSSQvGC~m~C~FCa---Tg~~G~~RNLt~~EIv~Qv~~~~~~l~~~~~~~~~~~~~~~~~~~~i~NiVfMGmGE 189 (384)
+...+|-+| ||.+.|.||. |......+.++..|+++++........ ..+..|.|+| ||
T Consensus 19 G~r~~vf~~-GCN~~C~~C~n~~~~~~~~~~~~~~~e~~~ei~~~~~~~~-----------------~~~~~v~~sG-GE 79 (245)
T 3c8f_A 19 GIRFITFFQ-GCLMRCLYCHNRDTWDTHGGKEVTVEDLMKEVVTYRHFMN-----------------ASGGGVTASG-GE 79 (245)
T ss_dssp SEEEEEEES-CCSCCCTTCSCGGGCCTTCSEEECHHHHHHHHGGGHHHHT-----------------STTCEEEEEE-SC
T ss_pred CCEEEEECC-CCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHC-----------------CCCCEEECCC-CC
T ss_conf 638999878-7478898999713418679918899999999999999752-----------------5787585355-56
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCHH----HHHHHCCCCCCEEEEEECCCCHHHHHHCCCCCCCCHHH
Q ss_conf 45428999999603768457787753688851387414----78860125651799840455113444123312578999
Q gi|254781120|r 190 PLCNFDNVKKSLSIASDSMGLSFSKRRITLSTSGFVPN----IARVGEEIGVMLAISLHAVSNDLRNILVPINRKYPLEM 265 (384)
Q Consensus 190 Pl~N~d~v~~ai~~l~~~~g~~~~~r~ITvST~Gi~p~----I~~la~~~~~~LAiSLha~~~~~R~~lmPi~~~~~l~~ 265 (384)
|++++|.+...++.+.+ .|+ ++.++|.|..+. ++++... -....+|+++++++...+++.. +.+.
T Consensus 80 P~l~~~~l~~l~~~~k~-~g~-----~~~l~TnG~~~~~~~~~~~l~~~-~d~v~id~~~~~~~~~~~~~g~----~~~~ 148 (245)
T 3c8f_A 80 AILQAEFVRDWFRACKK-EGI-----HTCLDTNGFVRRYDPVIDELLEV-TDLVMLDLKQMNDEIHQNLVGV----SNHR 148 (245)
T ss_dssp GGGGHHHHHHHHHHHHT-TTC-----CEEEEECCCCCCCCHHHHHHHHT-CSEEEEECCCSSHHHHHHHHSS----CSHH
T ss_pred CCCCHHHHHHHHHHHHH-HCC-----CEEEECCCCCCCCHHHHHHHHCC-CCEEEEECCCCCHHHHHHHHCC----CCHH
T ss_conf 53469999999998886-438-----47997788655534566665235-7579984354678899987386----5089
Q ss_pred HHHHHHHHHHHCCCCEEEEEEEEECCCCCCHHHHHHHHHHHCCCC--CEEEEEECCCCC-------CCC-----CCCCCH
Q ss_conf 999999998625894599999872699988899999999832545--316675127788-------798-----868898
Q gi|254781120|r 266 LIDACRHYPGLSNARRITFEYVMLKGINDSPRDALNLIKILKGIP--AKINLIPFNPWP-------GCE-----YLCSDQ 331 (384)
Q Consensus 266 l~~a~~~y~~~~~~rrit~EYvli~gvNDs~e~a~~L~~ll~~~~--~~vNLIp~N~~~-------~~~-----~~~~~~ 331 (384)
+++.++...+ . +.++.++++++.|+||+.++..+++++++.++ ..|+++||++.. +.+ .++|+.
T Consensus 149 vl~~l~~l~~-~-g~~v~i~~~~i~g~~d~~e~i~~i~~~i~~l~~~~~v~l~py~~~g~~k~~~~~~~y~~~~~~~p~~ 226 (245)
T 3c8f_A 149 TLEFAKYLAN-K-NVKVWIRYVVVPGWSDDDDSAHRLGEFTRDMGNVEKIELLPYHELGKHKWVAMGEEYKLDGVKPPKK 226 (245)
T ss_dssp HHHHHHHHHH-H-TCCEEEEEEECTTTTCCHHHHHHHHHHHHHHCCEEEEEEEECCCCSHHHHHHTTCCCTTTTCCCCCH
T ss_pred HHHHHHHHHH-C-CCCEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHCCCCCCCCCCCCCCH
T ss_conf 9999999997-8-9989999999899489999999999999857997558884476166411665185454457899999
Q ss_pred HHHHHHHHHHHHCCCEEE
Q ss_conf 999999999998798785
Q gi|254781120|r 332 KDIVTFSECIKRSGYSSP 349 (384)
Q Consensus 332 ~~i~~F~~~L~~~Gi~~t 349 (384)
+.++++.+++++.|+.|.
T Consensus 227 e~l~~~~~~~~~~G~~V~ 244 (245)
T 3c8f_A 227 ETMERVKGILEQYGHKVM 244 (245)
T ss_dssp HHHHHHHHHHHTTTCCBC
T ss_pred HHHHHHHHHHHHCCCEEE
T ss_conf 999999999998599067