Query gi|254781120|ref|YP_003065533.1| radical SAM protein [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 384
No_of_seqs 137 out of 1593
Neff 5.3
Searched_HMMs 13730
Date Wed Jun 1 11:37:30 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254781120.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1tv8a_ c.1.28.3 (A:) Molybden 98.5 3.3E-05 2.4E-09 56.2 18.6 176 115-322 13-198 (327)
2 d1r30a_ c.1.28.1 (A:) Biotin s 98.2 5E-05 3.6E-09 54.9 13.7 189 118-342 45-248 (312)
3 d1olta_ c.1.28.2 (A:) Oxygen-i 90.8 0.59 4.3E-05 24.8 17.1 204 124-349 59-282 (441)
4 d1blea_ c.38.1.1 (A:) Fructose 67.2 3.8 0.00028 18.7 5.6 108 238-356 30-148 (161)
5 d1j5xa_ c.80.1.1 (A:) Hypothet 67.1 2.1 0.00015 20.7 3.0 25 293-317 257-281 (329)
6 d1igwa_ c.1.12.7 (A:) Isocitra 65.9 3.8 0.00027 18.8 4.1 159 184-351 158-349 (416)
7 d1nrza_ c.38.1.1 (A:) Sorbose 63.4 4.5 0.00033 18.2 5.5 109 236-355 28-147 (163)
8 d1tz7a1 c.1.8.1 (A:1-485) Amyl 60.8 3.6 0.00026 18.9 3.3 27 295-321 414-440 (485)
9 d1kpia_ c.66.1.18 (A:) CmaA2 { 53.2 6.5 0.00047 17.0 6.4 169 121-312 67-250 (291)
10 d1wkya2 c.1.8.3 (A:34-330) Bet 52.4 6.7 0.00048 17.0 4.1 13 235-247 181-193 (297)
11 d1eswa_ c.1.8.1 (A:) Amylomalt 50.9 7 0.00051 16.8 3.4 47 85-138 207-260 (500)
12 d1x1na1 c.1.8.1 (A:2-524) Amyl 49.5 6.7 0.00048 17.0 3.1 26 295-320 448-473 (523)
13 d1uzxa_ d.20.1.2 (A:) Vacuolar 47.7 6.7 0.00049 16.9 2.9 52 36-93 4-59 (152)
14 d1v59a2 c.3.1.5 (A:161-282) Di 46.1 8.2 0.0006 16.3 6.0 57 287-350 27-83 (122)
15 d2v3ga1 c.1.8.3 (A:8-280) Endo 34.8 12 0.00088 15.1 5.6 80 261-341 191-273 (273)
16 d3elga1 d.98.2.1 (A:20-146) Pu 34.2 12 0.00089 15.0 4.9 54 52-112 8-61 (127)
17 d1moqa_ c.80.1.1 (A:) "Isomera 34.0 11 0.00077 15.5 2.1 12 115-126 128-139 (366)
18 d1f61a_ c.1.12.7 (A:) Isocitra 33.7 12 0.00091 14.9 8.3 299 13-352 9-347 (418)
19 d3lada2 c.3.1.5 (A:159-277) Di 31.0 14 0.001 14.6 5.8 56 287-349 26-81 (119)
20 d1d8ca_ c.1.13.1 (A:) Malate s 29.2 15 0.0011 14.4 2.2 35 38-72 136-180 (720)
21 d1n8ia_ c.1.13.1 (A:) Malate s 27.5 16 0.0011 14.2 2.2 28 183-210 349-378 (726)
22 d2bkya1 d.68.6.1 (A:9-97) DNA- 27.2 9.9 0.00072 15.7 1.1 35 180-223 1-35 (89)
23 d1lvla2 c.3.1.5 (A:151-265) Di 27.2 16 0.0011 14.2 5.3 57 286-349 24-80 (115)
24 d1jeqa1 a.140.2.1 (A:559-609) 26.7 10 0.00074 15.6 1.0 29 3-31 9-37 (51)
25 d1utaa_ d.58.52.1 (A:) Cell di 26.3 16 0.0012 14.1 3.4 60 294-355 14-76 (77)
26 d2a2pa1 c.47.1.23 (A:25-144) S 25.9 17 0.0012 14.0 2.6 19 253-272 69-87 (120)
27 d2f1fa2 d.58.18.6 (A:78-163) A 25.1 17 0.0012 13.9 4.4 71 279-352 2-73 (86)
28 d1dxla2 c.3.1.5 (A:153-275) Di 22.9 19 0.0014 13.6 5.7 56 287-349 29-84 (123)
29 d1fc3a_ a.4.6.3 (A:) Spo0A {Ba 22.7 19 0.0014 13.6 2.3 61 15-78 8-68 (119)
30 d2c0ha1 c.1.8.3 (A:18-367) end 22.2 19 0.0014 13.5 3.0 10 337-346 305-314 (350)
31 d1q3ea_ b.82.3.2 (A:) HCN pace 21.8 20 0.0014 13.5 4.6 54 14-68 11-65 (193)
32 d1zj8a1 d.58.36.1 (A:327-406) 21.8 20 0.0014 13.5 2.6 52 294-347 27-78 (80)
33 d1v38a_ a.60.1.2 (A:) Sam-doma 21.4 20 0.0015 13.4 2.1 44 11-63 9-52 (78)
34 d2gycm1 c.55.4.1 (M:3-115) Rib 21.3 20 0.0015 13.4 4.9 68 101-192 31-98 (113)
35 d1zj8a3 d.134.1.1 (A:407-555) 21.0 20 0.0015 13.3 2.2 14 262-275 114-127 (149)
36 d1ebda2 c.3.1.5 (A:155-271) Di 20.6 21 0.0015 13.3 6.5 57 287-350 26-82 (117)
No 1
>d1tv8a_ c.1.28.3 (A:) Molybdenum cofactor biosynthesis protein A MoaA {Staphylococcus aureus [TaxId: 1280]}
Probab=98.48 E-value=3.3e-05 Score=56.23 Aligned_cols=176 Identities=19% Similarity=0.275 Sum_probs=110.5
Q ss_pred EEEEEECCCCHHCCCCCCCCC-----CHH---HCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEC
Q ss_conf 389884065100486132244-----111---027898999999999999722203444434344454586110144101
Q gi|254781120|r 115 TLCVSSQVGCSLTCSFCYTGT-----QKL---VRNLTAEEILLQVLLARSLLGDFPGCEDIEGMVIPSVGRKISNIVMMG 186 (384)
Q Consensus 115 T~CvSSQvGC~m~C~FCaTg~-----~G~---~RNLt~~EIv~Qv~~~~~~l~~~~~~~~~~~~~~~~~~~~i~NiVfMG 186 (384)
+++|+----|.+.|+||.... ..+ .+-|+.+++..-+ ++ +.+ . .+..|.|.|
T Consensus 13 ~l~ieiT~~CNlrC~~C~~~~~~~~~~~~~~~~~~ls~e~~~~li---~~-~~~--------------~--g~~~v~~~G 72 (327)
T d1tv8a_ 13 DLRLSVTDRCNFRCDYCMPKEVFGDDFVFLPKNELLTFDEMARIA---KV-YAE--------------L--GVKKIRITG 72 (327)
T ss_dssp EEEEECCSCCSCCCTTTSCTTTSSTTCCCCCGGGSCCHHHHHHHH---HH-HHH--------------T--TCCEEEEES
T ss_pred CEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH---HH-HHH--------------C--CCEEEEECC
T ss_conf 579972210089694789760167777647721459999999999---99-987--------------5--983897379
Q ss_pred CCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCC--HHHHHHHCCCCCCEEEEEECCCCHHHHHHCCCCCCCCHH
Q ss_conf 454454289999996037684577877536888513874--147886012565179984045511344412331257899
Q gi|254781120|r 187 MGEPLCNFDNVKKSLSIASDSMGLSFSKRRITLSTSGFV--PNIARVGEEIGVMLAISLHAVSNDLRNILVPINRKYPLE 264 (384)
Q Consensus 187 mGEPl~N~d~v~~ai~~l~~~~g~~~~~r~ITvST~Gi~--p~I~~la~~~~~~LAiSLha~~~~~R~~lmPi~~~~~l~ 264 (384)
|||+++.|-+-....... . + ....+.++|-++. ..+++|.+..-..+.+||.+.+++.-+.+.-.+ ...+
T Consensus 73 -GEp~l~~~~~e~i~~~~~-~-~---~~~~~~~Tng~ll~~~~~~~l~~~g~~~i~iSldg~~~e~~~~~rg~~--g~~~ 144 (327)
T d1tv8a_ 73 -GEPLMRRDLDVLIAKLNQ-I-D---GIEDIGLTTNGLLLKKHGQKLYDAGLRRINVSLDAIDDTLFQSINNRN--IKAT 144 (327)
T ss_dssp -SCGGGSTTHHHHHHHHTT-C-T---TCCEEEEEECSTTHHHHHHHHHHHTCCEEEEECCCSSHHHHHHHHSSC--CCHH
T ss_pred -CCCCCCCCHHHHHHHHHH-H-C---CCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHEEEC--CCCC
T ss_conf -861246647999998754-2-1---222013444311120679999983998786202568787764510203--5421
Q ss_pred HHHHHHHHHHHHCCCCEEEEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCC
Q ss_conf 9999999998625894599999872699988899999999832545316675127788
Q gi|254781120|r 265 MLIDACRHYPGLSNARRITFEYVMLKGINDSPRDALNLIKILKGIPAKINLIPFNPWP 322 (384)
Q Consensus 265 ~l~~a~~~y~~~~~~rrit~EYvli~gvNDs~e~a~~L~~ll~~~~~~vNLIp~N~~~ 322 (384)
..+.+++... .. +-++.+..+++.+.|+..- ..+.++++.....+.++++.+..
T Consensus 145 ~~~~~~~~~~-~~-g~~~~~~~~v~~~~n~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 198 (327)
T d1tv8a_ 145 TILEQIDYAT-SI-GLNVKVNVVIQKGINDDQI--IPMLEYFKDKHIEIRFIEFMDVG 198 (327)
T ss_dssp HHHHHHHHHH-HT-TCEEEEEEEECTTTTGGGH--HHHHHHHHHTTCCEEEEECCCBC
T ss_pred HHHHHHHHHH-HC-CCCCCEEEEEECCCCCCCC--HHHHHHHHHHCCCCCEEEEECCC
T ss_conf 1236899999-85-9986325898568353100--89999997406541013531146
No 2
>d1r30a_ c.1.28.1 (A:) Biotin synthase {Escherichia coli [TaxId: 562]}
Probab=98.17 E-value=5e-05 Score=54.89 Aligned_cols=189 Identities=13% Similarity=0.192 Sum_probs=109.4
Q ss_pred EEECCCCHHCCCCCCCCC-----CHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHH
Q ss_conf 884065100486132244-----111027898999999999999722203444434344454586110144101454454
Q gi|254781120|r 118 VSSQVGCSLTCSFCYTGT-----QKLVRNLTAEEILLQVLLARSLLGDFPGCEDIEGMVIPSVGRKISNIVMMGMGEPLC 192 (384)
Q Consensus 118 vSSQvGC~m~C~FCaTg~-----~G~~RNLt~~EIv~Qv~~~~~~l~~~~~~~~~~~~~~~~~~~~i~NiVfMGmGEPl~ 192 (384)
++|- ||+.+|.||+-.+ ....+.++..||++++..+.+. -++.+++.|=..|..
T Consensus 45 ~~Tn-gC~~~C~fC~~~~~~~~~~~~~~~~~~e~i~~~~~~~~~~--------------------G~~~~~~~~g~~~~~ 103 (312)
T d1r30a_ 45 IKTG-ACPEDCKYCPQSSRYKTGLEAERLMEVEQVLESARKAKAA--------------------GSTRFCMGAAWKNPH 103 (312)
T ss_dssp EECS-CBSSCCSSCSCBTTSCTTCCCCCCCCHHHHHHHHHHHHHT--------------------TCSEEEEEECCSSCC
T ss_pred EECC-CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC--------------------CCEEEEECCCCCCCC
T ss_conf 5189-9888698399876689887642124557899999999974--------------------998999705777874
Q ss_pred --HHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCC--HHHHHHHCCCCCCEEEEEECCCCHHHHHHCCCCCCCCHHHHHH
Q ss_conf --289999996037684577877536888513874--1478860125651799840455113444123312578999999
Q gi|254781120|r 193 --NFDNVKKSLSIASDSMGLSFSKRRITLSTSGFV--PNIARVGEEIGVMLAISLHAVSNDLRNILVPINRKYPLEMLID 268 (384)
Q Consensus 193 --N~d~v~~ai~~l~~~~g~~~~~r~ITvST~Gi~--p~I~~la~~~~~~LAiSLha~~~~~R~~lmPi~~~~~l~~l~~ 268 (384)
..+.+...++.+.. ..+ .+.++ +|.+ ..+++|.+----.+.+.+-+ .++.+. .++ ++.+.++.++
T Consensus 104 ~~~~~~~~~~i~~~~~-~~~-----~~~~~-~~~l~~e~l~~lk~aG~~~i~~~iEs-~~~~~~-~~~--~~~~~~~~~~ 172 (312)
T d1r30a_ 104 ERDMPYLEQMVQGVKA-MGL-----EACMT-LGTLSESQAQRLANAGLDYYNHNLDT-SPEFYG-NII--TTRTYQERLD 172 (312)
T ss_dssp TTTHHHHHHHHHHHHH-TTS-----EEEEE-CSSCCHHHHHHHHHHCCCEEECCCBS-CHHHHH-HHC--CSSCHHHHHH
T ss_pred HHHHHHHHHHHHHCCC-CCC-----EEEEC-CCCCHHHHHHHHHCCCCEEEECCCCH-HHHHHC-CCC--CCCCHHHHHH
T ss_conf 0668999999985211-363-----23201-11103999888653460067421121-455533-478--9999999999
Q ss_pred HHHHHHHHCCCCEEEEEEEEECCCCCCHHHHHHHHHHHCCCC---CEEEEEECCCCCCCCCC---CCCHHHHHHHHHHHH
Q ss_conf 999998625894599999872699988899999999832545---31667512778879886---889899999999999
Q gi|254781120|r 269 ACRHYPGLSNARRITFEYVMLKGINDSPRDALNLIKILKGIP---AKINLIPFNPWPGCEYL---CSDQKDIVTFSECIK 342 (384)
Q Consensus 269 a~~~y~~~~~~rrit~EYvli~gvNDs~e~a~~L~~ll~~~~---~~vNLIp~N~~~~~~~~---~~~~~~i~~F~~~L~ 342 (384)
+++...+ . |-+++. .+|=|.-++.+|..+....++.+. ..|-+.++.|.++.++. +++.+.......+.+
T Consensus 173 ~~~~a~~-~-Gi~~~~--~~i~G~~et~~d~~~~l~~l~~l~~~~~~i~~~~~~p~~gT~l~~~~~~~~~e~l~~iA~~R 248 (312)
T d1r30a_ 173 TLEKVRD-A-GIKVCS--GGIVGLGETVKDRAGLLLQLANLPTPPESVPINMLVKVKGTPLADNDDVDAFDFIRTIAVAR 248 (312)
T ss_dssp HHHHHHH-H-HCEEEC--CEEECSSCCHHHHHHHHHHHHSSSSCCSEEEEEECCCCTTSTTSSCCCCCHHHHHHHHHHHH
T ss_pred HHHHHHH-H-CCCEEC--CEEECCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 9999998-3-466300--25755768679999999999855778876430541689984324456898899999999999
No 3
>d1olta_ c.1.28.2 (A:) Oxygen-independent coproporphyrinogen III oxidase HemN {Escherichia coli [TaxId: 562]}
Probab=90.77 E-value=0.59 Score=24.76 Aligned_cols=204 Identities=14% Similarity=0.275 Sum_probs=110.5
Q ss_pred CHHCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCHH-HHHHHHHHHHH
Q ss_conf 10048613224411102789899999999999972220344443434445458611014410145445-42899999960
Q gi|254781120|r 124 CSLTCSFCYTGTQKLVRNLTAEEILLQVLLARSLLGDFPGCEDIEGMVIPSVGRKISNIVMMGMGEPL-CNFDNVKKSLS 202 (384)
Q Consensus 124 C~m~C~FCaTg~~G~~RNLt~~EIv~Qv~~~~~~l~~~~~~~~~~~~~~~~~~~~i~NiVfMGmGEPl-~N~d~v~~ai~ 202 (384)
|+--|.||.--+.--.+.-...+.++.+. +.+... .....+++|+.| +-|=|-|- ++-+...+-++
T Consensus 59 C~~~C~yC~~~~~~~~~~~~~~~Y~~~L~---~Ei~~~---------~~~~~~~~v~~i-~~GGGTPt~L~~~~l~~ll~ 125 (441)
T d1olta_ 59 CHKLCYFCGCNKIVTRQQHKADQYLDALE---QEIVHR---------APLFAGRHVSQL-HWGGGTPTYLNKAQISRLMK 125 (441)
T ss_dssp ESSCCTTCCSSCEECSCTHHHHHHHHHHH---HHHHHH---------GGGGTTCCEEEE-EEEESCGGGSCHHHHHHHHH
T ss_pred CCCCCCCCCCEEECCCCCCHHHHHHHHHH---HHHHHH---------HHHCCCCCCCEE-EECCCCCCCCCHHHHHHHHH
T ss_conf 78889989583654888550999999999---999996---------676179850303-86188847789999999999
Q ss_pred CCCCCCCCCCCC-CEEEEEE--CCCC-HHHHHHHCCCCC-CEEEEEECCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHC
Q ss_conf 376845778775-3688851--3874-147886012565-1799840455113444123312578999999999998625
Q gi|254781120|r 203 IASDSMGLSFSK-RRITLST--SGFV-PNIARVGEEIGV-MLAISLHAVSNDLRNILVPINRKYPLEMLIDACRHYPGLS 277 (384)
Q Consensus 203 ~l~~~~g~~~~~-r~ITvST--~Gi~-p~I~~la~~~~~-~LAiSLha~~~~~R~~lmPi~~~~~l~~l~~a~~~y~~~~ 277 (384)
.+... +.+.. .-+|+.+ -.+- ..+..+. +.+| .+-+.+.+-+++..+. ++|.++.+++.++++.-- ..
T Consensus 126 ~l~~~--~~~~~~~e~t~E~~P~~~~~~~l~~l~-~~G~nRiSlGvQs~~~~vl~~---i~R~~~~~~~~~~~~~~r-~~ 198 (441)
T d1olta_ 126 LLREN--FQFNADAEISIEVDPREIELDVLDHLR-AEGFNRLSMGVQDFNKEVQRL---VNREQDEEFIFALLNHAR-EI 198 (441)
T ss_dssp HHHHH--SCEEEEEEEEEEECSSSCCTHHHHHHH-HTTCCEEEEEEECCCHHHHHH---HTCCCCHHHHHHHHHHHH-HT
T ss_pred HHHHH--CCCCCHHCCCCCCCCCCCCHHHHHHHH-HHCCCEEEECCHHCCHHHHHH---HHCCCCHHHHHHHHHHHH-HC
T ss_conf 87652--234500002210234542057899999-719855995120013045544---305787899999999877-41
Q ss_pred CCCEEEEEEEEECCC-CCCHHHHHHHHHHHCCC-CCEEEEEECCCCCCCCCC--------CCCH-HHHHHH---HHHHHH
Q ss_conf 894599999872699-98889999999983254-531667512778879886--------8898-999999---999998
Q gi|254781120|r 278 NARRITFEYVMLKGI-NDSPRDALNLIKILKGI-PAKINLIPFNPWPGCEYL--------CSDQ-KDIVTF---SECIKR 343 (384)
Q Consensus 278 ~~rrit~EYvli~gv-NDs~e~a~~L~~ll~~~-~~~vNLIp~N~~~~~~~~--------~~~~-~~i~~F---~~~L~~ 343 (384)
.-..|.+ =||=|+ +.+.++..+-.+.+..+ +-+|.+-+|...|+.... .|+. ++.+.| .+.|.+
T Consensus 199 g~~~vn~--DLI~GlPgqT~~~~~~tl~~~~~l~pd~is~y~~~~~p~~~~~q~~~~~~~lp~~~~~~~~~~~~~~~L~~ 276 (441)
T d1olta_ 199 GFTSTNI--DLIYGLPKQTPESFAFTLKRVAELNPDRLSVFNYAHLPTIFAAQRKIKDADLPSPQQKLDILQETIAFLTQ 276 (441)
T ss_dssp TCCSCEE--EEEESCTTCCHHHHHHHHHHHHHHCCSEEEEEECCCCTTTSGGGGGSCGGGSCCHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEC--CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 4423623--54432377603778899989985088742232211246126766302232002457888999999999987
Q ss_pred CCCEEE
Q ss_conf 798785
Q gi|254781120|r 344 SGYSSP 349 (384)
Q Consensus 344 ~Gi~~t 349 (384)
+|+.-.
T Consensus 277 ~GY~~~ 282 (441)
T d1olta_ 277 SGYQFI 282 (441)
T ss_dssp TTCEEE
T ss_pred CCCHHH
T ss_conf 383101
No 4
>d1blea_ c.38.1.1 (A:) Fructose permease, subunit IIb {Bacillus subtilis [TaxId: 1423]}
Probab=67.25 E-value=3.8 Score=18.75 Aligned_cols=108 Identities=17% Similarity=0.239 Sum_probs=69.9
Q ss_pred CEEEEEECCCCHHHHHHC----CCCCC---CCHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCHHHHHHHHHHHCCCC
Q ss_conf 179984045511344412----33125---78999999999998625894599999872699988899999999832545
Q gi|254781120|r 238 MLAISLHAVSNDLRNILV----PINRK---YPLEMLIDACRHYPGLSNARRITFEYVMLKGINDSPRDALNLIKILKGIP 310 (384)
Q Consensus 238 ~LAiSLha~~~~~R~~lm----Pi~~~---~~l~~l~~a~~~y~~~~~~rrit~EYvli~gvNDs~e~a~~L~~ll~~~~ 310 (384)
=+.++=.+++|+.+..+| |-+-+ +++++-.+.+... ... +.+++ ++.+ ++++|.+|++---++
T Consensus 30 IiVvdD~~A~D~~~k~~l~ma~P~gvk~~i~sve~a~~~l~~~-~~~-~~~v~---vl~~----~~~da~~l~~~g~~i- 99 (161)
T d1blea_ 30 IIVVSDDIAQDEMRKTLILSVAPSNVKASAVSVSKMAKAFHSP-RYE-GVTAM---LLFE----NPSDIVSLIEAGVPI- 99 (161)
T ss_dssp EEEECHHHHHCHHHHHHHHTSSCTTSEEEEECHHHHHHHHHCS-TTT-TCEEE---EEES----SSHHHHHHHTTTCCC-
T ss_pred EEEECCHHHCCHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHCC-CCC-CCEEE---EEEC----CHHHHHHHHHCCCCC-
T ss_conf 9997214607999999999538998738998899999998573-445-85699---9969----999999999759998-
Q ss_pred CEEEEEECCCCCCCC----CCCCCHHHHHHHHHHHHHCCCEEEECCCCCC
Q ss_conf 316675127788798----8688989999999999987987854158777
Q gi|254781120|r 311 AKINLIPFNPWPGCE----YLCSDQKDIVTFSECIKRSGYSSPIRTPRGL 356 (384)
Q Consensus 311 ~~vNLIp~N~~~~~~----~~~~~~~~i~~F~~~L~~~Gi~~tiR~srG~ 356 (384)
-.||+=.....+|.. .-.-+++.+++|. .|.+.|+.+++|..-..
T Consensus 100 ~~lNvG~m~~~~g~~~v~~~v~l~~ee~~~lk-~l~~~Gv~v~~q~vP~d 148 (161)
T d1blea_ 100 KTVNVGGMRFENHRRQITKSVSVTEQDIKAFE-TLSDKGVKLELRQLPSD 148 (161)
T ss_dssp CEEEEEEBCCCTTSEECSSSBEECHHHHHHHH-HHHHTTCEEEECSSTTS
T ss_pred CEEEEECCCCCCCCEEEECCEEECHHHHHHHH-HHHHCCCEEEEEECCCC
T ss_conf 88999067678997798564500899999999-99976987999989599
No 5
>d1j5xa_ c.80.1.1 (A:) Hypothetical protein TM0813 {Thermotoga maritima [TaxId: 2336]}
Probab=67.15 E-value=2.1 Score=20.70 Aligned_cols=25 Identities=16% Similarity=0.117 Sum_probs=14.3
Q ss_pred CCCHHHHHHHHHHHCCCCCEEEEEE
Q ss_conf 9888999999998325453166751
Q gi|254781120|r 293 NDSPRDALNLIKILKGIPAKINLIP 317 (384)
Q Consensus 293 NDs~e~a~~L~~ll~~~~~~vNLIp 317 (384)
.+..+....+.+.++.+..+|-+|.
T Consensus 257 ~~~~~~~~~~~~~~~~~g~~v~~i~ 281 (329)
T d1j5xa_ 257 SGMDEQEKRLRKELESLGATVLEVG 281 (329)
T ss_dssp TTCHHHHHHHHHHHHHTTCEEEEES
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEC
T ss_conf 4778999999999998299699988
No 6
>d1igwa_ c.1.12.7 (A:) Isocitrate lyase {Escherichia coli [TaxId: 562]}
Probab=65.95 E-value=3.8 Score=18.80 Aligned_cols=159 Identities=16% Similarity=0.204 Sum_probs=98.6
Q ss_pred EECCCCHHHHHHHHHHHHHC----------CCCCCCCCCCCCEEEEEECCCCHHHH--HHHC-CCCCC-EEE--------
Q ss_conf 10145445428999999603----------76845778775368885138741478--8601-25651-799--------
Q gi|254781120|r 184 MMGMGEPLCNFDNVKKSLSI----------ASDSMGLSFSKRRITLSTSGFVPNIA--RVGE-EIGVM-LAI-------- 241 (384)
Q Consensus 184 fMGmGEPl~N~d~v~~ai~~----------l~~~~g~~~~~r~ITvST~Gi~p~I~--~la~-~~~~~-LAi-------- 241 (384)
=.|-|+|+.=+.-|...++. +.+++-.+--..+..|||.-.+.+|+ +++. ...+. +-|
T Consensus 158 DtGfG~~~nv~r~vk~~i~AGaagihiEDQ~~~~KkCGHl~gK~lv~~~e~~~ki~AA~~a~d~~~~~~~IiARTDA~~a 237 (416)
T d1igwa_ 158 EAGFGGVLNAFELMKAMIEAGAAAVHFEDQLASVKKCGHMGGKVLVPTQEAIQKLVAARLCADVTGVPTLLVARTDADAA 237 (416)
T ss_dssp TTCSSSHHHHHHHHHHHHHTTCSEEEEESBCGGGCCCC----CEECCHHHHHHHHHHHHHHHHHHTCCCEEEEEECTTTC
T ss_pred CCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHH
T ss_conf 24567658999999999967871897226766430100148974678999999999999877427998279986230555
Q ss_pred E-EECCCCHHHHH-HCC--------CCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCHHHHHHHHHHHCCCCC
Q ss_conf 8-40455113444-123--------3125789999999999986258945999998726999888999999998325453
Q gi|254781120|r 242 S-LHAVSNDLRNI-LVP--------INRKYPLEMLIDACRHYPGLSNARRITFEYVMLKGINDSPRDALNLIKILKGIPA 311 (384)
Q Consensus 242 S-Lha~~~~~R~~-lmP--------i~~~~~l~~l~~a~~~y~~~~~~rrit~EYvli~gvNDs~e~a~~L~~ll~~~~~ 311 (384)
. +++ +-+.|+. .+- .--+..+++-++-+..|.. - ..-|++ +......++|+++++-++. +.
T Consensus 238 ~li~s-d~d~~D~~fi~g~Rt~eG~yr~~~G~d~aI~R~~aya~-g-ADli~~-----Et~~~~~e~a~~fa~~v~~-~~ 308 (416)
T d1igwa_ 238 DLITS-DCDPYDSEFITGERTSEGFFRTHAGIEQAISRGLAYAP-Y-ADLVWC-----ETSTPDLELARRFAQAIHA-KY 308 (416)
T ss_dssp CEESC-CCCGGGGGGEEEEECTTSCEEECCSHHHHHHHHHHHGG-G-CSEEEE-----CCSSCCHHHHHHHHHHHHH-HS
T ss_pred HHHHC-CCHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHC-C-CCEEEE-----ECCCCCHHHHHHHHHHCCC-CC
T ss_conf 44420-13111567205764734352224785999999998432-2-667753-----1689989999999986078-76
Q ss_pred EEEEEECCCCCCCCCCC-CCHHHHHHHHHHHHHCCCEEEEC
Q ss_conf 16675127788798868-89899999999999879878541
Q gi|254781120|r 312 KINLIPFNPWPGCEYLC-SDQKDIVTFSECIKRSGYSSPIR 351 (384)
Q Consensus 312 ~vNLIp~N~~~~~~~~~-~~~~~i~~F~~~L~~~Gi~~tiR 351 (384)
-.|++.||..|..+|.. -+.+.+..|++-|.+.|+...+=
T Consensus 309 p~~~l~yn~SPsfnw~~~~~~~~~~~~~~eL~~lGy~~~~~ 349 (416)
T d1igwa_ 309 PGKLLAYNCSPSFNWQKNLDDKTIASFQQQLSDMGYKFQFI 349 (416)
T ss_dssp TTCEEEEECC----------------HHHHHHHHTEEEEEE
T ss_pred HHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEE
T ss_conf 56762347888767201235567999999999659888996
No 7
>d1nrza_ c.38.1.1 (A:) Sorbose permease subunit IIb , EIIb-sor {Klebsiella pneumoniae [TaxId: 573]}
Probab=63.42 E-value=4.5 Score=18.25 Aligned_cols=109 Identities=19% Similarity=0.333 Sum_probs=70.9
Q ss_pred CCCEEEEEECCCCHHHHHHC----CCCCC---CCHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCHHHHHHHHHHHCC
Q ss_conf 65179984045511344412----33125---789999999999986258945999998726999888999999998325
Q gi|254781120|r 236 GVMLAISLHAVSNDLRNILV----PINRK---YPLEMLIDACRHYPGLSNARRITFEYVMLKGINDSPRDALNLIKILKG 308 (384)
Q Consensus 236 ~~~LAiSLha~~~~~R~~lm----Pi~~~---~~l~~l~~a~~~y~~~~~~rrit~EYvli~gvNDs~e~a~~L~~ll~~ 308 (384)
..=+.++=.+++|+.+..+| |-+-+ +++++-.+.+.... .. +.++++ +. -++++|.+|++---+
T Consensus 28 ~~IiVvdD~~A~D~~~k~~l~mA~P~gvk~~i~sve~a~~~l~~~~-~~-~~~v~i---l~----~~~~d~~~l~~~g~~ 98 (163)
T d1nrza_ 28 QRIIICNDDVFNDEVRRTLLRQAAPPGMKVNVVSLEKAVAVYHNPQ-YQ-DETVFY---LF----TNPHDVLTMVRQGVQ 98 (163)
T ss_dssp SEEEEECHHHHTCHHHHHHHHHTCCTTCEEEEECHHHHHHHHTCGG-GT-TCEEEE---EE----SSHHHHHHHHTTTCC
T ss_pred CEEEEECCHHHCCHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHCCC-CC-CCEEEE---EE----CCHHHHHHHHHCCCC
T ss_conf 9999976135089999999995279987799973999999985676-56-852999---98----998999999982899
Q ss_pred CCCEEEEEECCCCCCCCC----CCCCHHHHHHHHHHHHHCCCEEEECCCCC
Q ss_conf 453166751277887988----68898999999999998798785415877
Q gi|254781120|r 309 IPAKINLIPFNPWPGCEY----LCSDQKDIVTFSECIKRSGYSSPIRTPRG 355 (384)
Q Consensus 309 ~~~~vNLIp~N~~~~~~~----~~~~~~~i~~F~~~L~~~Gi~~tiR~srG 355 (384)
+ -.||+=.....+|... -.-+++.+++|.+ |.+.|+.+.+|..-.
T Consensus 99 i-~~lNvG~~~~~~g~~~i~~~v~l~~ee~~~lk~-l~~~Gv~v~~q~vP~ 147 (163)
T d1nrza_ 99 I-ATLNIGGMAWRPGKKQLTKAVSLDPQDIQAFRE-LDKLGVKLDLRVVAS 147 (163)
T ss_dssp C-SEEEEEEBCCCTTCEEEETTEEECHHHHHHHHH-HHHTTCEEEECSSTT
T ss_pred C-CEEEECCCCCCCCCEEEECCEEECHHHHHHHHH-HHHCCCEEEEEECCC
T ss_conf 8-789978887789987972645008999999999-997798799998959
No 8
>d1tz7a1 c.1.8.1 (A:1-485) Amylomaltase MalQ {Aquifex aeolicus [TaxId: 63363]}
Probab=60.75 E-value=3.6 Score=18.92 Aligned_cols=27 Identities=19% Similarity=0.213 Sum_probs=16.5
Q ss_pred CHHHHHHHHHHHCCCCCEEEEEECCCC
Q ss_conf 889999999983254531667512778
Q gi|254781120|r 295 SPRDALNLIKILKGIPAKINLIPFNPW 321 (384)
Q Consensus 295 s~e~a~~L~~ll~~~~~~vNLIp~N~~ 321 (384)
+.+-+.++.+.+-.-++.+-+||+.+.
T Consensus 414 ~~~~~~~~~r~~~~s~s~l~i~~~qDl 440 (485)
T d1tz7a1 414 EEKVNEELIRLVLISRAKFAIIQMQDL 440 (485)
T ss_dssp GGGHHHHHHHHHHHSCCSEEEEEHHHH
T ss_pred CHHHHHHHHHHHHHCCHHHHHEEHHHH
T ss_conf 247999999999708462511109987
No 9
>d1kpia_ c.66.1.18 (A:) CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=53.19 E-value=6.5 Score=17.05 Aligned_cols=169 Identities=14% Similarity=0.125 Sum_probs=92.5
Q ss_pred CCCCHHCCCCC--C--CCCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC--CCCCCCCCCCCEEEEECCCCHH---
Q ss_conf 06510048613--2--2441110278989999999999997222034444343--4445458611014410145445---
Q gi|254781120|r 121 QVGCSLTCSFC--Y--TGTQKLVRNLTAEEILLQVLLARSLLGDFPGCEDIEG--MVIPSVGRKISNIVMMGMGEPL--- 191 (384)
Q Consensus 121 QvGC~m~C~FC--a--Tg~~G~~RNLt~~EIv~Qv~~~~~~l~~~~~~~~~~~--~~~~~~~~~i~NiVfMGmGEPl--- 191 (384)
-|||..|-.=+ | +|-...-=+++. +|+-.+++.....+....... ...+..+.+-..||-+||-|-+
T Consensus 67 DiGCG~G~~~~~~a~~~g~~v~git~s~----~q~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~fD~i~sie~~eH~~~~ 142 (291)
T d1kpia_ 67 DIGCGWGSTMRHAVAEYDVNVIGLTLSE----NQYAHDKAMFDEVDSPRRKEVRIQGWEEFDEPVDRIVSLGAFEHFADG 142 (291)
T ss_dssp EETCTTSHHHHHHHHHHCCEEEEEESCH----HHHHHHHHHHHHSCCSSCEEEEECCGGGCCCCCSEEEEESCGGGTTCC
T ss_pred EECCCCHHHHHHHHHHCCCCEEECCCHH----HHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCEEEECHHHHHCCHH
T ss_conf 7457625899999986475303105208----899999999875111113445542011336651457620167760125
Q ss_pred ------HHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCHHHHHHHCCCCCCEEEEEECCCCHHHHHHCCCCCCCCHHH
Q ss_conf ------42899999960376845778775368885138741478860125651799840455113444123312578999
Q gi|254781120|r 192 ------CNFDNVKKSLSIASDSMGLSFSKRRITLSTSGFVPNIARVGEEIGVMLAISLHAVSNDLRNILVPINRKYPLEM 265 (384)
Q Consensus 192 ------~N~d~v~~ai~~l~~~~g~~~~~r~ITvST~Gi~p~I~~la~~~~~~LAiSLha~~~~~R~~lmPi~~~~~l~~ 265 (384)
.||+.+++.+..+..|.|. .-+.|.++.+... .++.......+.....+=++..|.|...--++.+
T Consensus 143 ~~~~~~~~~~~~f~~i~~~LkpgG~------~~l~~i~~~~~~~--~~~~~~~~p~~~~~~~~fi~kyiFpgg~lps~~~ 214 (291)
T d1kpia_ 143 AGDAGFERYDTFFKKFYNLTPDDGR------MLLHTITIPDKEE--AQELGLTSPMSLLRFIKFILTEIFPGGRLPRISQ 214 (291)
T ss_dssp SSCCSTTHHHHHHHHHHHTSCTTCE------EEEEEEECCCHHH--HHHHTCCCCHHHHHHHHHHHHHTCTTCCCCCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCC------EEEEEEECCCCCH--HHHCCCCCCHHHCCCCHHHHHHHCCCCCCCCHHH
T ss_conf 5556789999999999974799875------5789996057510--1222677740000101689887307888887788
Q ss_pred HHHHHHHHHHHCCCCEEEEEEEEECCCCCCHHHHHHHHHHHCCCCCE
Q ss_conf 99999999862589459999987269998889999999983254531
Q gi|254781120|r 266 LIDACRHYPGLSNARRITFEYVMLKGINDSPRDALNLIKILKGIPAK 312 (384)
Q Consensus 266 l~~a~~~y~~~~~~rrit~EYvli~gvNDs~e~a~~L~~ll~~~~~~ 312 (384)
+..+++. + +=.| .++ .|-+...++-|..+.+.+..+
T Consensus 215 ~~~~~e~----~-gl~v-~~~-----~~~~~hYa~TL~~W~~~f~~~ 250 (291)
T d1kpia_ 215 VDYYSSN----A-GWKV-ERY-----HRIGANYVPTLNAWADALQAH 250 (291)
T ss_dssp HHHHHHH----H-TCEE-EEE-----EECGGGHHHHHHHHHHHHHHT
T ss_pred HHHHHCC----C-CCCC-CEE-----EECCCCHHHHHHHHHHHHHHH
T ss_conf 8753012----0-0122-023-----545560999999999999997
No 10
>d1wkya2 c.1.8.3 (A:34-330) Beta-mannanase {Bacillus sp. JAMB-602 [TaxId: 244966]}
Probab=52.40 E-value=6.7 Score=16.96 Aligned_cols=13 Identities=15% Similarity=0.018 Sum_probs=7.7
Q ss_pred CCCCEEEEEECCC
Q ss_conf 5651799840455
Q gi|254781120|r 235 IGVMLAISLHAVS 247 (384)
Q Consensus 235 ~~~~LAiSLha~~ 247 (384)
..-++.+|.|.=.
T Consensus 181 ~~~~i~y~~H~Y~ 193 (297)
T d1wkya2 181 PQRNTMFSIHMYE 193 (297)
T ss_dssp TTCCEEEEEEEST
T ss_pred CCCCEEEEECCCC
T ss_conf 5334247531466
No 11
>d1eswa_ c.1.8.1 (A:) Amylomaltase MalQ {Thermus aquaticus [TaxId: 271]}
Probab=50.90 E-value=7 Score=16.80 Aligned_cols=47 Identities=13% Similarity=0.144 Sum_probs=26.2
Q ss_pred CCCEEEECCCCCCCCCEEEEEEECCCCCCCEEEE------EECCCCHHCCCCCCCCCC-HH
Q ss_conf 4303775247777898155443023467733898------840651004861322441-11
Q gi|254781120|r 85 TRKWLLRFPARCIGGPVEIETVYIPEKSRGTLCV------SSQVGCSLTCSFCYTGTQ-KL 138 (384)
Q Consensus 85 T~K~L~~l~d~~~~dg~~IEsVlip~~~r~T~Cv------SSQvGC~m~C~FCaTg~~-G~ 138 (384)
.+++.-.|+-+.-.|+..| . -++...|+ +.++|||=. .|-.+|+. |+
T Consensus 207 gI~L~gDlpigv~~~saDv---W---~~~~lF~ld~~~~~~~~~GaPPD-~fs~~GQ~WG~ 260 (500)
T d1eswa_ 207 GIRIIGDMPIFVAEDSAEV---W---AHPEWFHLDEEGRPTVVAGVPPD-YFSETGQRWGN 260 (500)
T ss_dssp TCEEEEEEESSCCSSSHHH---H---HCGGGBCBCTTSCBSEECEECCC-SSCSSCEECCC
T ss_pred CCCEEEEEEEEECCCCHHH---H---CCHHHHHHCCCCCCCCCCCCCCC-CCCCCCCCCCC
T ss_conf 9944664224666886888---7---49887631325797500288999-87745566899
No 12
>d1x1na1 c.1.8.1 (A:2-524) Amylomaltase MalQ {Potato (Solanum tuberosum) [TaxId: 4113]}
Probab=49.55 E-value=6.7 Score=16.96 Aligned_cols=26 Identities=23% Similarity=0.245 Sum_probs=18.9
Q ss_pred CHHHHHHHHHHHCCCCCEEEEEECCC
Q ss_conf 88999999998325453166751277
Q gi|254781120|r 295 SPRDALNLIKILKGIPAKINLIPFNP 320 (384)
Q Consensus 295 s~e~a~~L~~ll~~~~~~vNLIp~N~ 320 (384)
..+-+.+|.+++-.-++.+-+||..+
T Consensus 448 ~~~~~~~l~~~~~~s~s~l~i~~lqD 473 (523)
T d1x1na1 448 EEEISRGLIEGAVSSVARIAIIPMQD 473 (523)
T ss_dssp GGGHHHHHHHHHHTSSCSEEEEEHHH
T ss_pred CHHHHHHHHHHHHHCCHHHHHEEHHH
T ss_conf 41799999999985814263253998
No 13
>d1uzxa_ d.20.1.2 (A:) Vacuolar protein sorting-associated {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=47.70 E-value=6.7 Score=16.94 Aligned_cols=52 Identities=19% Similarity=0.226 Sum_probs=29.2
Q ss_pred HHHHHHHHHCC---CCCHHHHCCCCHHHHHHHHHCCCCCCCC-EEEEEECCCCCCCEEEECC
Q ss_conf 99999998717---9996783347889999986202257870-2346531454430377524
Q gi|254781120|r 36 SQIWKWIYVRG---IRDFQGMSDISQEVRHLLNQHFSIIYPE-IVDEKISCDGTRKWLLRFP 93 (384)
Q Consensus 36 ~QI~~wiy~k~---v~~f~~MtnLpk~lR~~L~e~~~i~~l~-iv~~~~S~DGT~K~L~~l~ 93 (384)
.++.+|+|+-- .++.+ -+-++....|.+ | ..++ -.+..++.||+.+.|+.+.
T Consensus 4 ~~~~~wL~~vlq~~Y~~~~---~v~~dv~~~l~~-y--~~L~p~~~~~~~~dg~~~~Ll~l~ 59 (152)
T d1uzxa_ 4 EAVVNWLFKVIQPIYNDGR---TTFHDSLALLDN-F--HSLRPRTRVFTHSDGTPQLLLSIY 59 (152)
T ss_dssp HHHHHHHHHHHHHHCTTHH---HHHHHHHHHHHH-C--TTEEEEEEEEECTTSCEEEEEEEE
T ss_pred HHHHHHHHHHHHHHCCCCC---HHHHHHHHHHHH-C--CCCCCCCCEEECCCCCCCEEEEEE
T ss_conf 7899999997655268925---689999999986-8--999864222645899801589987
No 14
>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=46.07 E-value=8.2 Score=16.28 Aligned_cols=57 Identities=16% Similarity=0.288 Sum_probs=39.7
Q ss_pred EEECCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEE
Q ss_conf 8726999888999999998325453166751277887988688989999999999987987854
Q gi|254781120|r 287 VMLKGINDSPRDALNLIKILKGIPAKINLIPFNPWPGCEYLCSDQKDIVTFSECIKRSGYSSPI 350 (384)
Q Consensus 287 vli~gvNDs~e~a~~L~~ll~~~~~~vNLIp~N~~~~~~~~~~~~~~i~~F~~~L~~~Gi~~ti 350 (384)
+.+.+=.- +-+++..+..+.++|.+|-.++..-.. -+.+-.+.+++.|++.|+.+..
T Consensus 27 vIiG~G~i----g~E~A~~l~~lG~~Vtii~~~~~~l~~---~d~ei~~~l~~~l~~~GV~i~~ 83 (122)
T d1v59a2 27 TIIGGGII----GLEMGSVYSRLGSKVTVVEFQPQIGAS---MDGEVAKATQKFLKKQGLDFKL 83 (122)
T ss_dssp EEECCSHH----HHHHHHHHHHTTCEEEEECSSSSSSSS---SCHHHHHHHHHHHHHTTCEEEC
T ss_pred EEECCCCH----HHHHHHHHHHHCCCEEEEEECCCCCHH---HHHHHHHHHHHHHHHCCCEEEE
T ss_conf 99987706----889999998608514689855632334---5443489999999725514882
No 15
>d2v3ga1 c.1.8.3 (A:8-280) Endoglucanase H N-terminal domain {Clostridium thermocellum [TaxId: 1515]}
Probab=34.75 E-value=12 Score=15.06 Aligned_cols=80 Identities=11% Similarity=0.133 Sum_probs=52.8
Q ss_pred CCHHHHHHHHHHHHHHCCCCEEEE-EEEEECCCCCCHHHHHHHHHHHC-CCCCEEEEEECCCCCCCCCCC-CCHHHHHHH
Q ss_conf 789999999999986258945999-99872699988899999999832-545316675127788798868-898999999
Q gi|254781120|r 261 YPLEMLIDACRHYPGLSNARRITF-EYVMLKGINDSPRDALNLIKILK-GIPAKINLIPFNPWPGCEYLC-SDQKDIVTF 337 (384)
Q Consensus 261 ~~l~~l~~a~~~y~~~~~~rrit~-EYvli~gvNDs~e~a~~L~~ll~-~~~~~vNLIp~N~~~~~~~~~-~~~~~i~~F 337 (384)
.++.+++....++.+ ..++.|.+ |+-.-.+-.|..+-.+.+.+.++ ..+...-++-||.-...+|+- ++.+..++|
T Consensus 191 ~~~~~~~~~~~~~~~-~~~KPi~i~E~G~~~~~~~~~~W~~~~~~~~~~~~p~v~~~vwfn~~~~~Dwr~~~~p~~~~af 269 (273)
T d2v3ga1 191 QSFDQVFSRAYQALA-SINKPIIIAEFASAEIGGNKARWITEAYNSIRTSYNKVIAAVWFHENKETDWRINSSPEALAAY 269 (273)
T ss_dssp CCHHHHHHHHHHHHT-TSSSCEEEEEEEECSTTSCHHHHHHHHHHHHHHHCTTEEEEEEECCBSSSBCCTTSSHHHHHHH
T ss_pred HHHHHHHHHHHHHHH-HCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCHHHHHHH
T ss_conf 439999999999998-6899889972567788984469999999999862885799998338988897556998999999
Q ss_pred HHHH
Q ss_conf 9999
Q gi|254781120|r 338 SECI 341 (384)
Q Consensus 338 ~~~L 341 (384)
++-|
T Consensus 270 r~~l 273 (273)
T d2v3ga1 270 REAI 273 (273)
T ss_dssp HHHC
T ss_pred HHHC
T ss_conf 9749
No 16
>d3elga1 d.98.2.1 (A:20-146) Putative periplasmic protein BVU2443 {Bacteroides vulgatus [TaxId: 821]}
Probab=34.25 E-value=12 Score=15.00 Aligned_cols=54 Identities=13% Similarity=0.267 Sum_probs=34.0
Q ss_pred HHCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCCEEEECCCCCCCCCEEEEEEECCCCC
Q ss_conf 8334788999998620225787023465314544303775247777898155443023467
Q gi|254781120|r 52 GMSDISQEVRHLLNQHFSIIYPEIVDEKISCDGTRKWLLRFPARCIGGPVEIETVYIPEKS 112 (384)
Q Consensus 52 ~MtnLpk~lR~~L~e~~~i~~l~iv~~~~S~DGT~K~L~~l~d~~~~dg~~IEsVlip~~~ 112 (384)
+++.||...++.+..+|.=....-++......++..|=..|. +|.+|| +-+.++
T Consensus 8 d~~~LP~~a~~fi~~~Fp~a~I~~~~~e~~~~~~~~YeV~l~-----ng~ei~--F~~~G~ 61 (127)
T d3elga1 8 DVNKLPVAAREMIGKHFSQTKVAYIKIEKDLFQTTSYDVKLA-----DGIELE--FNSKGE 61 (127)
T ss_dssp CGGGSCHHHHHHHHHHCTTSCEEEEEEEECTTCCEEEEEEET-----TSCEEE--ECTTSC
T ss_pred CHHHCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEEEC-----CCEEEE--ECCCCC
T ss_conf 834687999999998789993699999448766617999965-----983999--908999
No 17
>d1moqa_ c.80.1.1 (A:) "Isomerase domain" of glucosamine 6-phosphate synthase (GLMS) {Escherichia coli [TaxId: 562]}
Probab=33.98 E-value=11 Score=15.49 Aligned_cols=12 Identities=33% Similarity=0.548 Sum_probs=5.6
Q ss_pred EEEEEECCCCHH
Q ss_conf 389884065100
Q gi|254781120|r 115 TLCVSSQVGCSL 126 (384)
Q Consensus 115 T~CvSSQvGC~m 126 (384)
|+.|+...+-++
T Consensus 128 ti~iT~~~~S~l 139 (366)
T d1moqa_ 128 SLAICNVPGSSL 139 (366)
T ss_dssp EEEEESSTTCHH
T ss_pred EEEEECCCCCHH
T ss_conf 899989999978
No 18
>d1f61a_ c.1.12.7 (A:) Isocitrate lyase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=33.67 E-value=12 Score=14.94 Aligned_cols=299 Identities=14% Similarity=0.115 Sum_probs=146.1
Q ss_pred CHHHHHH-HHHHCCCCCCCCCCHHHHHHHHHHHCCCCCHH-HHC-CCCHHHHHHHHHCCCCCCCCEEEEEECCCC-CCCE
Q ss_conf 9899999-99986998545775589999999871799967-833-478899999862022578702346531454-4303
Q gi|254781120|r 13 MREELEE-ALLKIGIPQRHVRMRTSQIWKWIYVRGIRDFQ-GMS-DISQEVRHLLNQHFSIIYPEIVDEKISCDG-TRKW 88 (384)
Q Consensus 13 s~~EL~~-~l~~~G~p~~~~~fRa~QI~~wiy~k~v~~f~-~Mt-nLpk~lR~~L~e~~~i~~l~iv~~~~S~DG-T~K~ 88 (384)
+-+++++ |..+--+....-+|.+.+|.+ .++....+ .+. ...+.||+.|.+.-.+ ..--.-|| +-+.
T Consensus 9 ~~~~~~~~w~~~pRw~~i~r~yta~dv~~---lrgs~~~~~~~a~~~a~~Lr~lL~~~~~v------~~~Ga~d~~~A~~ 79 (418)
T d1f61a_ 9 SAEQIQQEWDTNPRWKDVTRTYSAEDVVA---LQGSVVEEHTLARRGAEVLWEQLHDLEWV------NALGALTGNMAVQ 79 (418)
T ss_dssp CHHHHHHHHHHCGGGTTCCCSSCHHHHHH---TSTTCCCCCHHHHHHHHHHHHHHHHSSCE------EEEBCCSHHHHHH
T ss_pred HHHHHHHHHHCCCCCCCCCCCCCHHHHHH---HCCCCCCCCHHHHHHHHHHHHHHHCCCCE------EECCCCCHHHHHH
T ss_conf 59999999862988277879989999998---66887754257899999999998369978------8414477899999
Q ss_pred EEECCCCCCCCCEEEEEEECCCCCCCEEEEEECCCCHHCCCCCCCCCCHH-HCCCCHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 77524777789815544302346773389884065100486132244111-02789899999999999972220344443
Q gi|254781120|r 89 LLRFPARCIGGPVEIETVYIPEKSRGTLCVSSQVGCSLTCSFCYTGTQKL-VRNLTAEEILLQVLLARSLLGDFPGCEDI 167 (384)
Q Consensus 89 L~~l~d~~~~dg~~IEsVlip~~~r~T~CvSSQvGC~m~C~FCaTg~~G~-~RNLt~~EIv~Qv~~~~~~l~~~~~~~~~ 167 (384)
..+. | .++++ +|. ..+...=..++...- ..-++..|+.+++-.+.+.+.........
T Consensus 80 ~~ka-------G--f~aiY----------~SG---~~vaa~~s~s~~g~PD~gl~~~~ev~~~v~~I~~~~~~~d~~~~~ 137 (418)
T d1f61a_ 80 QVRA-------G--LKAIY----------LSG---WQVAGDANLSGHTYPDQSLYPANSVPQVVRRINNALQRADQIAKI 137 (418)
T ss_dssp HHHT-------T--CSCEE----------ECH---HHHHHHCCTTCCCCCSSSCSCTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHH-------C--CCEEE----------ECH---HHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9981-------9--98898----------542---765234545568866655551678999999999887889999987
Q ss_pred CC-CCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCC----------CCCCCCCCCCCEEEEEECCCCHHHH--HHH-C
Q ss_conf 43-44454586110144101454454289999996037----------6845778775368885138741478--860-1
Q gi|254781120|r 168 EG-MVIPSVGRKISNIVMMGMGEPLCNFDNVKKSLSIA----------SDSMGLSFSKRRITLSTSGFVPNIA--RVG-E 233 (384)
Q Consensus 168 ~~-~~~~~~~~~i~NiVfMGmGEPl~N~d~v~~ai~~l----------~~~~g~~~~~r~ITvST~Gi~p~I~--~la-~ 233 (384)
+. ........||--=--.|-|.|+.=+.-|...++.= ..++-.+--.-+..|||.-.+.+|+ +++ +
T Consensus 138 ~~~~~~~~~~~PIIaDaDtGfG~~~nv~rtvk~~i~AGaAgihiEDQ~~~~KkCGH~~GK~lvp~~e~~~ki~Aa~~a~d 217 (418)
T d1f61a_ 138 EGDTSVENWLAPIVADGEAGFGGALNVYELQKALIAAGVAGSHWEDQLASEKKCGHLGGKVLIPTQQHIRTLTSARLAAD 217 (418)
T ss_dssp HTCCSCSCSSCCEEEECTTCSSSHHHHHHHHHHHHHHTCSEEEEESBCGGGCBCSTTCBCEECCHHHHHHHHHHHHHHHH
T ss_pred HCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 40466433567768753333453789999999999837868997346777765566677666889999999999987664
Q ss_pred CCCCCEEEEEECCCCHHHHHHCC------------C--------CCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEECCCC
Q ss_conf 25651799840455113444123------------3--------125789999999999986258945999998726999
Q gi|254781120|r 234 EIGVMLAISLHAVSNDLRNILVP------------I--------NRKYPLEMLIDACRHYPGLSNARRITFEYVMLKGIN 293 (384)
Q Consensus 234 ~~~~~LAiSLha~~~~~R~~lmP------------i--------~~~~~l~~l~~a~~~y~~~~~~rrit~EYvli~gvN 293 (384)
...+.+ -+-|=+|..=..++. - --+..+++-++-+..|.. . +--|.|| .+ -
T Consensus 218 ~~~~~~--~iiARTDA~~a~~i~s~~d~~D~~~i~g~rt~eG~y~~~~g~e~AI~Ra~aya~-~-gd~i~~e----~~-~ 288 (418)
T d1f61a_ 218 VADVPT--VVIARTDAEAATLITSDVDERDQPFITGERTREGFYRTKNGIEPCIARAKAYAP-F-ADLIWME----TG-T 288 (418)
T ss_dssp HTTCCC--EEEEEECTTTCCEESCSCSTTTGGGEEEEECTTSCEEECCSHHHHHHHHHHHGG-G-CSEEEEC----CS-S
T ss_pred CCCCCE--EEEEECCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH-C-CCEEEEC----CC-C
T ss_conf 379984--899971602323553334323344445545766400145778999999996354-3-6718850----57-8
Q ss_pred CCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCC-CCHHHHHHHHHHHHHCCCEEEECC
Q ss_conf 88899999999832545316675127788798868-898999999999998798785415
Q gi|254781120|r 294 DSPRDALNLIKILKGIPAKINLIPFNPWPGCEYLC-SDQKDIVTFSECIKRSGYSSPIRT 352 (384)
Q Consensus 294 Ds~e~a~~L~~ll~~~~~~vNLIp~N~~~~~~~~~-~~~~~i~~F~~~L~~~Gi~~tiR~ 352 (384)
.+.++++++++-++ -+...|+++||-.|..+|+. =+.+.+..|++-|.+.|+...+-.
T Consensus 289 ~~~ee~~~f~~~v~-~~~~~~~l~~~~sPsf~w~~~~~~~~~~~~~~eL~~~Gy~~~~i~ 347 (418)
T d1f61a_ 289 PDLEAARQFSEAVK-AEYPDQMLAYNCSPSFNWKKHLDDATIAKFQKELAAMGFKFQFIT 347 (418)
T ss_dssp CCHHHHHHHHHHHH-TTCTTCEEEEECCSSSCHHHHSCHHHHHHHHHHHHHHTEEEEEET
T ss_pred CCHHHHHHHHHHCC-CCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEC
T ss_conf 99999999986248-873332035676567770114677665433999996096299961
No 19
>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}
Probab=31.03 E-value=14 Score=14.64 Aligned_cols=56 Identities=7% Similarity=-0.050 Sum_probs=38.6
Q ss_pred EEECCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEE
Q ss_conf 872699988899999999832545316675127788798868898999999999998798785
Q gi|254781120|r 287 VMLKGINDSPRDALNLIKILKGIPAKINLIPFNPWPGCEYLCSDQKDIVTFSECIKRSGYSSP 349 (384)
Q Consensus 287 vli~gvNDs~e~a~~L~~ll~~~~~~vNLIp~N~~~~~~~~~~~~~~i~~F~~~L~~~Gi~~t 349 (384)
+.+.|=.-+. +++..++.+.++|.+|-.++... ..-+.+-...+++.|++.|+.+.
T Consensus 26 ~IiG~G~ig~----E~A~~l~~~G~~Vtiv~~~~~ll---~~~d~ei~~~l~~~l~~~Gv~i~ 81 (119)
T d3lada2 26 GVIGAGVIGL----ELGSVWARLGAEVTVLEAMDKFL---PAVDEQVAKEAQKILTKQGLKIL 81 (119)
T ss_dssp EEECCSHHHH----HHHHHHHHTTCEEEEEESSSSSS---TTSCHHHHHHHHHHHHHTTEEEE
T ss_pred EEECCCHHHH----HHHHHHHHCCCCEEEEEEECCCC---CCCCCHHHHHHHHHHHHCCCEEE
T ss_conf 9998872799----99999997699357887602247---75310037999999875591510
No 20
>d1d8ca_ c.1.13.1 (A:) Malate synthase G {Escherichia coli [TaxId: 562]}
Probab=29.23 E-value=15 Score=14.43 Aligned_cols=35 Identities=20% Similarity=0.364 Sum_probs=18.0
Q ss_pred HHHHHHHCCCCCHHH-HC---------CCCHHHHHHHHHCCCCCC
Q ss_conf 999998717999678-33---------478899999862022578
Q gi|254781120|r 38 IWKWIYVRGIRDFQG-MS---------DISQEVRHLLNQHFSIIY 72 (384)
Q Consensus 38 I~~wiy~k~v~~f~~-Mt---------nLpk~lR~~L~e~~~i~~ 72 (384)
+|+.+|..-+-+-+. .+ -+=+--|+.|.+.|.+..
T Consensus 136 LYDALYGTD~I~e~~~~~~~Ynp~RG~kVI~~ar~fLD~~~PL~~ 180 (720)
T d1d8ca_ 136 LYDALYGSDIIPQEGAMVSGYDPQRGEQVIAWVRRFLDESLPLEN 180 (720)
T ss_dssp HHHHHHTSSSSCCSSCCSSSCCHHHHHHHHHHHHHHHHHHSCBSS
T ss_pred HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 898874566567778765411088999999999999997556478
No 21
>d1n8ia_ c.1.13.1 (A:) Malate synthase G {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=27.52 E-value=16 Score=14.22 Aligned_cols=28 Identities=11% Similarity=0.032 Sum_probs=16.4
Q ss_pred EEECCCCHHH--HHHHHHHHHHCCCCCCCC
Q ss_conf 4101454454--289999996037684577
Q gi|254781120|r 183 VMMGMGEPLC--NFDNVKKSLSIASDSMGL 210 (384)
Q Consensus 183 VfMGmGEPl~--N~d~v~~ai~~l~~~~g~ 210 (384)
+.-.-|+|.- =+|.++.++.-+.|-.+-
T Consensus 349 il~~dG~eipegi~Da~~t~l~a~hdl~~~ 378 (726)
T d1n8ia_ 349 IVDTDGSEVFEGIMDALFTGLIAIHGLKAS 378 (726)
T ss_dssp EEETTCCEEEHHHHHHHHHHHHHGGGGSCC
T ss_pred EECCCCCCCCCHHHHHHHHHHHHHHHHHHC
T ss_conf 122667737430438999999999998714
No 22
>d2bkya1 d.68.6.1 (A:9-97) DNA-binding protein AlbA {Archaeon Sulfolobus solfataricus, Sso10b1 [TaxId: 2287]}
Probab=27.24 E-value=9.9 Score=15.67 Aligned_cols=35 Identities=26% Similarity=0.565 Sum_probs=23.1
Q ss_pred CEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECC
Q ss_conf 01441014544542899999960376845778775368885138
Q gi|254781120|r 180 SNIVMMGMGEPLCNFDNVKKSLSIASDSMGLSFSKRRITLSTSG 223 (384)
Q Consensus 180 ~NiVfMGmGEPl~N~d~v~~ai~~l~~~~g~~~~~r~ITvST~G 223 (384)
+|++|-| ..|+.||= ..++-.|++ +...|++.--|
T Consensus 1 ~n~I~IG-~Kp~mnYV--~a~~~~l~~------g~~~V~iKArG 35 (89)
T d2bkya1 1 SNVVLIG-KKPVMNYV--LAALTLLNQ------GVSEIVIKARG 35 (89)
T ss_dssp CCEEECC-SSCHHHHH--HHHHHHHHT------TCCEEEEEEET
T ss_pred CCEEEEC-CCCHHHHH--HHHHHHHHC------CCCEEEEEEEH
T ss_conf 9999987-98679999--999999867------99769999831
No 23
>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}
Probab=27.22 E-value=16 Score=14.18 Aligned_cols=57 Identities=12% Similarity=0.093 Sum_probs=38.1
Q ss_pred EEEECCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEE
Q ss_conf 9872699988899999999832545316675127788798868898999999999998798785
Q gi|254781120|r 286 YVMLKGINDSPRDALNLIKILKGIPAKINLIPFNPWPGCEYLCSDQKDIVTFSECIKRSGYSSP 349 (384)
Q Consensus 286 Yvli~gvNDs~e~a~~L~~ll~~~~~~vNLIp~N~~~~~~~~~~~~~~i~~F~~~L~~~Gi~~t 349 (384)
-+.+.|=.-+.|-|.. ++.+.++|.||-..+.... .-+.+-.+.+.+.|++.|+.+.
T Consensus 24 vvIiGgG~~G~E~A~~----l~~~g~~Vtlve~~~~il~---~~d~~~~~~l~~~l~~~gV~i~ 80 (115)
T d1lvla2 24 LVVVGGGYIGLELGIA----YRKLGAQVSVVEARERILP---TYDSELTAPVAESLKKLGIALH 80 (115)
T ss_dssp EEEECCSHHHHHHHHH----HHHHTCEEEEECSSSSSST---TSCHHHHHHHHHHHHHHTCEEE
T ss_pred EEEECCCHHHHHHHHH----HHHCCCCEEEEEEECCCCC---CCCCHHHHHHHHHHHHHCCEEE
T ss_conf 9999997789999999----8432661278854000046---5320267999999986013077
No 24
>d1jeqa1 a.140.2.1 (A:559-609) DNA binding C-terminal domain of ku70 {Human (Homo sapiens) [TaxId: 9606]}
Probab=26.66 E-value=10 Score=15.61 Aligned_cols=29 Identities=21% Similarity=0.145 Sum_probs=23.2
Q ss_pred CCCCCCCCCCCHHHHHHHHHHCCCCCCCC
Q ss_conf 66585735899899999999869985457
Q gi|254781120|r 3 FLKKESLIGMMREELEEALLKIGIPQRHV 31 (384)
Q Consensus 3 ~~~K~~L~~ls~~EL~~~l~~~G~p~~~~ 31 (384)
+.++-+|-.|+.++|++++...|+|-.-+
T Consensus 9 ~~~~~~L~kltV~~LK~~lk~~gL~~sGk 37 (51)
T d1jeqa1 9 HISKGTLGKFTVPMLKEACRAYGLKSGLK 37 (51)
T ss_dssp HHHHTCGGGCCHHHHHHHHHHTTCCCCSS
T ss_pred HHCCCCHHHCCHHHHHHHHHHCCCCCCCC
T ss_conf 85608686683999999999869998886
No 25
>d1utaa_ d.58.52.1 (A:) Cell division protein FtsN {Escherichia coli [TaxId: 562]}
Probab=26.30 E-value=16 Score=14.07 Aligned_cols=60 Identities=15% Similarity=0.096 Sum_probs=37.4
Q ss_pred CCHHHHHHHHHHHCCCCCEEEEEECCCCC---CCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCC
Q ss_conf 88899999999832545316675127788---798868898999999999998798785415877
Q gi|254781120|r 294 DSPRDALNLIKILKGIPAKINLIPFNPWP---GCEYLCSDQKDIVTFSECIKRSGYSSPIRTPRG 355 (384)
Q Consensus 294 Ds~e~a~~L~~ll~~~~~~vNLIp~N~~~---~~~~~~~~~~~i~~F~~~L~~~Gi~~tiR~srG 355 (384)
-+.+.|+.|.+-|........+.+-+.+- -.|| ++.+..+...+.|++.|+...|+++-|
T Consensus 14 ~~~~nA~~l~~~L~~~g~~~~i~~~~~~yRV~vGpf--~~~~~A~~~~~~L~~~G~~~~i~~~~~ 76 (77)
T d1utaa_ 14 RGAEQAETVRAQLAFEGFDSKITTNNGWNRVVIGPV--KGKENADSTLNRLKMAGHTNCIRLAAG 76 (77)
T ss_dssp SCHHHHHHHHHHHHHHTCCEEEEECSSSEEEEESSC--BTTTHHHHHHHHHHHHCCSCCBCCCCC
T ss_pred CCHHHHHHHHHHHHHCCCCCEECCCCCEEEEEECCC--CCHHHHHHHHHHHHHCCCCCEEEEECC
T ss_conf 698899999999986588516537996899997784--999999999999998699877998158
No 26
>d2a2pa1 c.47.1.23 (A:25-144) Selenoprotein M {Mouse (Mus musculus) [TaxId: 10090]}
Probab=25.92 E-value=17 Score=14.02 Aligned_cols=19 Identities=5% Similarity=0.155 Sum_probs=12.7
Q ss_pred HHCCCCCCCCHHHHHHHHHH
Q ss_conf 41233125789999999999
Q gi|254781120|r 253 ILVPINRKYPLEMLIDACRH 272 (384)
Q Consensus 253 ~lmPi~~~~~l~~l~~a~~~ 272 (384)
+-++| .+|..+++-+-|++
T Consensus 69 E~i~I-ekw~~deI~~~L~E 87 (120)
T d2a2pa1 69 ERIPL-SQMTRDEINALVQE 87 (120)
T ss_dssp EEEEC-SSSCHHHHHHHHHH
T ss_pred EEEEC-CCCCHHHHHHHHHH
T ss_conf 88740-20789999999997
No 27
>d2f1fa2 d.58.18.6 (A:78-163) Acetolactate synthase small subunit, IlvH {Escherichia coli [TaxId: 562]}
Probab=25.12 E-value=17 Score=13.92 Aligned_cols=71 Identities=14% Similarity=0.087 Sum_probs=46.5
Q ss_pred CCEEEEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCC-CEEEECC
Q ss_conf 9459999987269998889999999983254531667512778879886889899999999999879-8785415
Q gi|254781120|r 279 ARRITFEYVMLKGINDSPRDALNLIKILKGIPAKINLIPFNPWPGCEYLCSDQKDIVTFSECIKRSG-YSSPIRT 352 (384)
Q Consensus 279 ~rrit~EYvli~gvNDs~e~a~~L~~ll~~~~~~vNLIp~N~~~~~~~~~~~~~~i~~F~~~L~~~G-i~~tiR~ 352 (384)
|..|.-|.+|++=- -+.++-.++.+++..+.++| |..++..-.---.-+.+++++|.+.|...| |.-.+|.
T Consensus 2 g~~verEl~LvKv~-~~~~~~~~i~~i~~~f~a~i--vd~~~~~~iie~tG~~~~id~fi~~l~~~g~I~EivRS 73 (86)
T d2f1fa2 2 GAHVEREIMLVKIQ-ASGYGRDEVKRNTEIFRGQI--IDVTPSLYTVQLAGTSGKLDAFLASIRDVAKIVEVARS 73 (86)
T ss_dssp SCEEEEEEEEEEEE-CCTHHHHHHHHHHHHTTCEE--EEECSSEEEEEEEECHHHHHHHHHHHTTTSEEEEEEEC
T ss_pred CCHHEEEEEEEEEE-CCHHHHHHHHHHHHHCCEEE--EECCCCEEEEEEECCHHHHHHHHHHHHCCCCEEEEECC
T ss_conf 67230588999997-77523999999998638199--98569989999968999999999986042978999737
No 28
>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}
Probab=22.88 E-value=19 Score=13.62 Aligned_cols=56 Identities=13% Similarity=0.147 Sum_probs=38.7
Q ss_pred EEECCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEE
Q ss_conf 872699988899999999832545316675127788798868898999999999998798785
Q gi|254781120|r 287 VMLKGINDSPRDALNLIKILKGIPAKINLIPFNPWPGCEYLCSDQKDIVTFSECIKRSGYSSP 349 (384)
Q Consensus 287 vli~gvNDs~e~a~~L~~ll~~~~~~vNLIp~N~~~~~~~~~~~~~~i~~F~~~L~~~Gi~~t 349 (384)
+.+.|=.- +-+++..+..+.++|.+|-.++... + .-+.+-...+.+.|++.|+.+.
T Consensus 29 viiG~G~i----glE~A~~~~~~G~~Vtvi~~~~~~l-~--~~d~~~~~~l~~~l~~~GI~i~ 84 (123)
T d1dxla2 29 VVIGAGYI----GLEMGSVWGRIGSEVTVVEFASEIV-P--TMDAEIRKQFQRSLEKQGMKFK 84 (123)
T ss_dssp EESCCSHH----HHHHHHHHHHHTCEEEEECSSSSSS-T--TSCHHHHHHHHHHHHHSSCCEE
T ss_pred EEECCCHH----HHHHHHHHHHCCCEEEEEEECCCCC-C--HHHHCCHHHHHHHHHCCCCEEE
T ss_conf 99866527----8899999985399179999756447-3--1230310655445540562488
No 29
>d1fc3a_ a.4.6.3 (A:) Spo0A {Bacillus stearothermophilus [TaxId: 1422]}
Probab=22.69 E-value=19 Score=13.59 Aligned_cols=61 Identities=8% Similarity=0.138 Sum_probs=45.7
Q ss_pred HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHCCCCCCCCEEEE
Q ss_conf 9999999986998545775589999999871799967833478899999862022578702346
Q gi|254781120|r 15 EELEEALLKIGIPQRHVRMRTSQIWKWIYVRGIRDFQGMSDISQEVRHLLNQHFSIIYPEIVDE 78 (384)
Q Consensus 15 ~EL~~~l~~~G~p~~~~~fRa~QI~~wiy~k~v~~f~~MtnLpk~lR~~L~e~~~i~~l~iv~~ 78 (384)
.++.+.+.++|.|++.+-|+ -...--.--+.+.+-...+.|.|...+++.|...+..|.+.
T Consensus 8 ~~i~~lL~~lGip~h~kGy~---Yl~~AI~l~~~d~~~l~~itK~LYp~IA~ky~TT~s~VERa 68 (119)
T d1fc3a_ 8 ASITSIIHEIGVPAHIKGYL---YLREAIAMVYHDIELLGSITKVLYPDIAKKYNTTASRVERA 68 (119)
T ss_dssp HHHHHHHHHHTCCTTSHHHH---HHHHHHHHHHHCGGGGGGTTTTHHHHHHHHHTSCHHHHHHH
T ss_pred HHHHHHHHHCCCCCCCCHHH---HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
T ss_conf 99999999919994223199---99999999987888998589997999999959987999999
No 30
>d2c0ha1 c.1.8.3 (A:18-367) endo-1,4-beta-mannosidase {Blue mussel (Mytilus edulis) [TaxId: 6550]}
Probab=22.16 E-value=19 Score=13.52 Aligned_cols=10 Identities=30% Similarity=0.428 Sum_probs=3.9
Q ss_pred HHHHHHHCCC
Q ss_conf 9999998798
Q gi|254781120|r 337 FSECIKRSGY 346 (384)
Q Consensus 337 F~~~L~~~Gi 346 (384)
+.+.+...|+
T Consensus 305 ~~~~~~~~~~ 314 (350)
T d2c0ha1 305 MFEWAYTKGY 314 (350)
T ss_dssp HHHHHHHTTC
T ss_pred HHHHHHHHCC
T ss_conf 9999997087
No 31
>d1q3ea_ b.82.3.2 (A:) HCN pacemaker channel {Mouse (Mus musculus) [TaxId: 10090]}
Probab=21.83 E-value=20 Score=13.47 Aligned_cols=54 Identities=11% Similarity=0.177 Sum_probs=39.6
Q ss_pred HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCC-HHHHCCCCHHHHHHHHHCC
Q ss_conf 899999999869985457755899999998717999-6783347889999986202
Q gi|254781120|r 14 REELEEALLKIGIPQRHVRMRTSQIWKWIYVRGIRD-FQGMSDISQEVRHLLNQHF 68 (384)
Q Consensus 14 ~~EL~~~l~~~G~p~~~~~fRa~QI~~wiy~k~v~~-f~~MtnLpk~lR~~L~e~~ 68 (384)
..++.+|+...+.|. +-..|..+-+++.|++...+ .+-+..+|..++..+..+.
T Consensus 11 ~~~i~~~m~~~~i~~-~l~~rv~~y~~~~~~~~~~~~~~i~~~lp~~l~~~i~~~~ 65 (193)
T d1q3ea_ 11 YKQVEQYMSFHKLPA-DFRQKIHDYYEHRYQGKMFDEDSILGELNGPLREEIVNFN 65 (193)
T ss_dssp HHHHHHHHHHTTCCH-HHHHHHHHHHHHHHTTCCCCHHHHHHHSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCH-HHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHH
T ss_conf 999999999849999-9999999999998650366599999879922348999999
No 32
>d1zj8a1 d.58.36.1 (A:327-406) Sulfite reductase NirA {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=21.79 E-value=20 Score=13.47 Aligned_cols=52 Identities=12% Similarity=0.082 Sum_probs=22.3
Q ss_pred CCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCE
Q ss_conf 888999999998325453166751277887988688989999999999987987
Q gi|254781120|r 294 DSPRDALNLIKILKGIPAKINLIPFNPWPGCEYLCSDQKDIVTFSECIKRSGYS 347 (384)
Q Consensus 294 Ds~e~a~~L~~ll~~~~~~vNLIp~N~~~~~~~~~~~~~~i~~F~~~L~~~Gi~ 347 (384)
-+.+.++.|+++++.... .-|.+-+.-+..+.-.+.+.+....+.|.+.|+.
T Consensus 27 it~~ql~~la~ia~~yg~--g~i~lTtrq~l~l~~i~~~~~~~v~~~L~~~Gl~ 78 (80)
T d1zj8a1 27 VSGTILTAVADLMARAGS--DRIRFTPYQKLVILDIPDALLDDLIAGLDALGLQ 78 (80)
T ss_dssp EEHHHHHHHHHHHHHHTC--CCEEECTTSCEEEEEECHHHHHHHHHHHHHTTCB
T ss_pred ECHHHHHHHHHHHHHHCC--CEEEECCCCCEEECCCCHHHHHHHHHHHHHCCCC
T ss_conf 999999999999997399--9498879875897589989999999999986499
No 33
>d1v38a_ a.60.1.2 (A:) Sam-domain protein samsn-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=21.44 E-value=20 Score=13.42 Aligned_cols=44 Identities=14% Similarity=0.217 Sum_probs=29.5
Q ss_pred CCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHCCCCHHHHHH
Q ss_conf 89989999999986998545775589999999871799967833478899999
Q gi|254781120|r 11 GMMREELEEALLKIGIPQRHVRMRTSQIWKWIYVRGIRDFQGMSDISQEVRHL 63 (384)
Q Consensus 11 ~ls~~EL~~~l~~~G~p~~~~~fRa~QI~~wiy~k~v~~f~~MtnLpk~lR~~ 63 (384)
...++++.+||..+|++. |. .-.-++++.+.+.+.++..+.-+.
T Consensus 9 ~~~~~~V~~WL~~lgL~~----Y~-----~~F~~~g~~~~~~l~~l~~~dL~~ 52 (78)
T d1v38a_ 9 RENHQTIQEFLERIHLQE----YT-----STLLLNGYETLDDLKDIKESHLIE 52 (78)
T ss_dssp CSSCCBHHHHHHTTTCGG----GH-----HHHHHHTCCBHHHHTTCCHHHHHH
T ss_pred CCCHHHHHHHHHHCCHHH----HH-----HHHHHCCCCCHHHHCCCCHHHHHH
T ss_conf 998889999999888899----99-----999984916638771099999967
No 34
>d2gycm1 c.55.4.1 (M:3-115) Ribosomal protein L18 (L18p) {Escherichia coli [TaxId: 562]}
Probab=21.33 E-value=20 Score=13.40 Aligned_cols=68 Identities=18% Similarity=0.152 Sum_probs=46.1
Q ss_pred EEEEEEECCCCCCCEEEEEECCCCHHCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf 15544302346773389884065100486132244111027898999999999999722203444434344454586110
Q gi|254781120|r 101 VEIETVYIPEKSRGTLCVSSQVGCSLTCSFCYTGTQKLVRNLTAEEILLQVLLARSLLGDFPGCEDIEGMVIPSVGRKIS 180 (384)
Q Consensus 101 ~~IEsVlip~~~r~T~CvSSQvGC~m~C~FCaTg~~G~~RNLt~~EIv~Qv~~~~~~l~~~~~~~~~~~~~~~~~~~~i~ 180 (384)
..|-+=+|.+.+..|+|-+|-..=.+. +..+...|..+.+.|++++.-+-.- ..|+
T Consensus 31 khiyaQiIdd~~~~tl~saST~~k~~~------~~~~~~~n~~aA~~vG~~la~ra~~------------------~gI~ 86 (113)
T d2gycm1 31 RHIYAQVIAPNGSEVLVAASTVEKAIA------EQLKYTGNKDAAAAVGKAVAERALE------------------KGIK 86 (113)
T ss_dssp SCEEEEEEETTTTEEEEEEETTGGGGT------SCCSCSSSHHHHHHHHHHHHHHHHH------------------HTCC
T ss_pred CCEEEEEEECCCCCEEEEEEEHHHHHH------HHCCCCCCHHHHHHHHHHHHHHHHH------------------CCCC
T ss_conf 817999998469917887410356665------4327775328999999999999998------------------7999
Q ss_pred EEEEECCCCHHH
Q ss_conf 144101454454
Q gi|254781120|r 181 NIVMMGMGEPLC 192 (384)
Q Consensus 181 NiVfMGmGEPl~ 192 (384)
.|||==-|.+.|
T Consensus 87 ~vvfDR~g~~Yh 98 (113)
T d2gycm1 87 DVSFDRSGFQYH 98 (113)
T ss_dssp CCCCBCCSCCSS
T ss_pred EEEECCCCCCCC
T ss_conf 999879998641
No 35
>d1zj8a3 d.134.1.1 (A:407-555) Sulfite reductase NirA {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=20.95 E-value=20 Score=13.35 Aligned_cols=14 Identities=21% Similarity=-0.047 Sum_probs=7.6
Q ss_pred CHHHHHHHHHHHHH
Q ss_conf 89999999999986
Q gi|254781120|r 262 PLEMLIDACRHYPG 275 (384)
Q Consensus 262 ~l~~l~~a~~~y~~ 275 (384)
.+.++++++-+++.
T Consensus 114 ~v~~~v~~ii~~y~ 127 (149)
T d1zj8a3 114 ELGDYIDRVVRNFV 127 (149)
T ss_dssp THHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
T ss_conf 99999999999999
No 36
>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=20.63 E-value=21 Score=13.30 Aligned_cols=57 Identities=11% Similarity=0.014 Sum_probs=38.2
Q ss_pred EEECCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEE
Q ss_conf 8726999888999999998325453166751277887988688989999999999987987854
Q gi|254781120|r 287 VMLKGINDSPRDALNLIKILKGIPAKINLIPFNPWPGCEYLCSDQKDIVTFSECIKRSGYSSPI 350 (384)
Q Consensus 287 vli~gvNDs~e~a~~L~~ll~~~~~~vNLIp~N~~~~~~~~~~~~~~i~~F~~~L~~~Gi~~ti 350 (384)
+.+.|=.-..| ++..+..+.++|.+|-..+.... .-+.+-.+.+.+.|++.|+.+..
T Consensus 26 ~IiGgG~ig~E----~A~~l~~~G~~Vtlve~~~~il~---~~d~~~~~~l~~~l~~~GI~i~~ 82 (117)
T d1ebda2 26 VVIGGGYIGIE----LGTAYANFGTKVTILEGAGEILS---GFEKQMAAIIKKRLKKKGVEVVT 82 (117)
T ss_dssp EEECCSHHHHH----HHHHHHHTTCEEEEEESSSSSST---TSCHHHHHHHHHHHHHTTCEEEE
T ss_pred EEECCCCCCEE----EEEEECCCCCEEEEEEECCEECC---CCCCHHHHHHHHHHHHCCCEEEC
T ss_conf 99999865216----44300125517999973130011---34412378999999755978984
Done!