HHsearch alignment of GI: 254781121 and MMDB domain: 3dtd_A_
>3dtd_A (A:) Invasion-associated protein B; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 2.35A {Bartonella henselae}
Probab=99.96 E-value=4.6e-29 Score=196.96 Aligned_cols=154 Identities=15% Similarity=0.191 Sum_probs=134.1
Q ss_pred HHHHHHHHHHHCCCHHHCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEEEEECC
Q ss_conf 99986543321010110123775899993598716556641200023444555530579986178776103689831034
Q gi|254781121|r 24 SVSAGYANASQPEPTLRNQFSRWSVYVYPDLNKKLCFSLSVPVTVEPLEGVRHGVNFFIISLKKEENSAYVSELVMDYPL 103 (185)
Q Consensus 24 ~~~~~~a~a~~~~~~~~~~f~dW~v~~~~~~~~~~C~i~s~p~~~~~~~~~~~~~~~~~v~~~~~~~~~~~vs~~~gy~~ 103 (185)
......+.++++++...++|+||+++|.+++++++|++.|.+. .++++.++.+.+++.++...++++..||++
T Consensus 10 ~~~~~~a~~~~~~~~~~~~f~dW~~~C~~~~~~~~C~~~q~~~-------~~~g~~~~~i~~~~~~~~~~~~~i~~P~g~ 82 (175)
T 3dtd_A 10 TTKDTVATLPNGASSLTETYGLWSINCGIQEGKKVCFMHRQEV-------NDQNRVVVAMSVVLNADGVVSGNLTVPFGI 82 (175)
T ss_dssp --------------CBCEEETTEEEEECCC---CCEEEEEEEE-------BTTCCEEEEEEEEECTTSCEEEEEEECSSB
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEEEE-------CCCCCEEEEEEEEECCCCCEEEEEEEECCE
T ss_conf 8743113589987312435478638972379997789998760-------679966789999988998647999996760
Q ss_pred CCCCCEEEEECCCCCCCCCCCEECCCCCCEECCCCCCHHHHHHHHCCCEEEEEEEC---CCCCEEEEEEECCCHHHHHHH
Q ss_conf 67772699971665554443100037874102456696789997367769999991---899889998514428999998
Q gi|254781121|r 104 DEEEMVSLEVKGKNASGTIFKMKSYNNRAAFEKRSQDTVLIEEMKRGKELVVSAKS---KRGTNTRYIYSLIGLSDSLAD 180 (185)
Q Consensus 104 ~~~~~v~l~Id~~~~~~~~~~~~~~~~~a~~~~~~~d~~~i~amk~G~~~~v~~~s---~~g~~~~~~~SL~GFt~A~~~ 180 (185)
.+.+++.+.||++++. ...++..|.+.||++....|.++|++||+|++++|.++. .+|++++++|||+||++||++
T Consensus 83 ~l~~gv~~~vD~~~~~-~~~~~~~C~~~gC~a~~~~~~~~i~amk~G~~~~v~~~~~~~~~G~~v~~~~SL~Gf~~Al~~ 161 (175)
T 3dtd_A 83 LVSKPVRLQVDEGKAV-IETGIRTCVPAGCIVPIVFDKNYVAALRAGKHLKLAMTIAAPGEPPLNDLFVQLNGFSNALNR 161 (175)
T ss_dssp CTTSCEEEEETTSSCE-EEECCCEEETTEEEEEEEECHHHHHHHHHCSEEEEEEEBSSTTCCEEEEEEEECTTHHHHHHH
T ss_pred ECCCCCEEEEECCCCE-EEEEEEEECCCCEEEECCCCHHHHHHHHCCCCCEEEEEECCCCCCCEEEEEECCCCHHHHHHH
T ss_conf 6499978999769740-687668873775187705898999999718844799997468888668877832269999999
Q ss_pred HHH-CC
Q ss_conf 873-49
Q gi|254781121|r 181 IRK-CN 185 (185)
Q Consensus 181 ~~k-c~ 185 (185)
+++ |+
T Consensus 162 l~~~~~ 167 (175)
T 3dtd_A 162 LIALQK 167 (175)
T ss_dssp HHHHHH
T ss_pred HHHHHH
T ss_conf 999876