HHsearch alignment of GI: 254781122 and MMDB domain: 3cq9_A_
>3cq9_A (A:) Uncharacterized protein LP_1622; Q88WK7_lacpl, transferase, thiamine pyrophosphokinase, NESG, LPR114, structural genomics, PSI-2; 2.20A {Lactobacillus plantarum WCFS1}
Probab=100.00 E-value=0 Score=343.50 Aligned_cols=203 Identities=21% Similarity=0.274 Sum_probs=176.9
Q ss_pred EEEEEEECCCCCCCHHHHHHHC-CCCEEEEEHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHCC--CCEEEECCCCCCCH
Q ss_conf 0699998779998168898513-49499991888999988997349997211299889974031--88599205677794
Q gi|254781122|r 10 IDFAILLNGDIRVTNRLLCAIE-SCKVIAADGGICHASQLKVVPELWIGDFDSVDRTLLQQWSS--IKRIFYPNDKDMAD 86 (222)
Q Consensus 10 ~~~~Ii~nG~~~~~~~~~~~~~-~~~iIavDgGa~~l~~~~i~Pd~iiGDfDSi~~~~~~~~~~--~~~i~~~~dkD~TD 86 (222)
++++|++||+.+. +....++ .+.+||||||+++|+++|+.||++||||||++++.+++++. .+.+++|++||+||
T Consensus 3 ~~~~iv~~g~~~~--~~~~~~~~~~~iIaaDgGa~~l~~~gi~Pd~iiGDfDSi~~~~~~~~~~~~~~~~~~~~~KD~TD 80 (227)
T 3cq9_A 3 TIVNLLVGGPTAN--YPADLTTIPGPWVGADRGALRLVKRGIQPVXVVGDFDSIDAAELQTVKDALVGAIVVKPDQDHTD 80 (227)
T ss_dssp CEEEEECSSCGGG--CSSCGGGSCSCEEEETHHHHHHHHTTCCCSEEESCC---------CHHHHHHTSEEECCCSSSCH
T ss_pred CEEEEEECCCCHH--HHHHHHHCCCCEEEECHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHCCCCEEECCHHCCCHH
T ss_conf 3899998999637--58998631696999985899999879985789877998986788999864896598572206217
Q ss_pred HHHHHHHHHH-CCCCEEEEEECCCCCCHHHHHHHHHHHHHHH--HCCCEEEEEECCCEEEEEECCCEE-EEECCCEEEEE
Q ss_conf 8999999997-5997599995378781247889999999886--269819999489189999679569-97059808999
Q gi|254781122|r 87 GEIAVHKALQ-SGARNIILVGSISGQRFDYALQHITLATSLK--KKNINVTLTSGIEEVFILVPGKHS-FDLPENSVFSI 162 (222)
Q Consensus 87 ~ekAL~~~~~-~~~~~i~i~gg~~G~R~DH~lani~~L~~~~--~~~~~i~l~~~~~~i~~l~~g~~~-~~~~~g~~~Sl 162 (222)
+||||++|.+ +++.+++++|| +|||+||+|+|+++|+++. ..+.+++++++++.++++++|.+. +..+.++++|+
T Consensus 81 ~e~Al~~~~~~~~~~~i~i~Ga-~GgR~DH~lani~~l~~~~~~~~~~~i~l~~~~~~i~~l~~g~~~~~~~~~~~~~Sl 159 (227)
T 3cq9_A 81 TQLAIKSIFEQLQPDEVHLYGA-TGGRLDHLLANXWLVLDPVFRQWAPQIKLIDKQNSVRFFLPGDYQITKEADKRYLAF 159 (227)
T ss_dssp HHHHHHHHHHHTCCSEEEEESC-SSSCHHHHHHHHSGGGSHHHHTTGGGEEEECSSEEEEEECSEEEEEECCTTCCEEEE
T ss_pred HHHHHHHHHHHCCCCEEEEEEC-CCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEEEECCCEEEECCCCCEEEEE
T ss_conf 9999999986349988999956-899766899999999866752469609999799099999799779973789449999
Q ss_pred EECCCCCEEEEECEEEECCCCEECCCCCEEEEEEECCC-EEEEEECCEEEEEECCCC
Q ss_conf 75157762573041665378785278753884998495-799995790999974410
Q gi|254781122|r 163 VCLEDIENITITGAKYTLSHHSLSLGSSRAVSNVVTKN-LTIMLDQGLAILISRPYD 218 (222)
Q Consensus 163 ~p~~~~~~vt~~Glky~L~~~~l~~~~~~~~SN~~~~~-~~I~~~~G~llvi~~~kd 218 (222)
+|+++ ++||++||||||++++|.+ +++++||++.++ ++|++++|.+++| +++|
T Consensus 160 ipl~~-~~vt~~Glky~L~~~~l~~-~~~~~SNe~~~~~~~I~~~~G~llvi-~~~d 213 (227)
T 3cq9_A 160 VPLXP-XHLTLPDEKYQLDAAYNAY-PISWASNEFSGNTGHFSFDAGVLAVI-QSRD 213 (227)
T ss_dssp EESSC-EEEEESSBSSCEEEEEESS-CCCEEEECBSSSEEEEEECSSCEEEE-EECC
T ss_pred EECCC-CEEEEECCEEECCCCCCCC-CCCEEEEEEECCEEEEEECCCEEEEE-EECC
T ss_conf 83477-3699836287458855679-98458579989848999868889999-9713