HHsearch results for GI: 254781122 and protein with PDBid: 3cq9_A
>3cq9_A Uncharacterized protein LP_1622; Q88WK7_lacpl, transferase, thiamine pyrophosphokinase, NESG, LPR114, structural genomics, PSI-2; 2.20A {Lactobacillus plantarum WCFS1}
Probab=100.00 E-value=0 Score=344.71 Aligned_cols=204 Identities=22% Similarity=0.289 Sum_probs=172.8
Q ss_pred EEEEEEECCCCCCCHHHHHHHC-CCCEEEEEHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHCC--CCEEEECCCCCCCH
Q ss_conf 0699998779998168898513-49499991888999988997349997211299889974031--88599205677794
Q gi|254781122|r 10 IDFAILLNGDIRVTNRLLCAIE-SCKVIAADGGICHASQLKVVPELWIGDFDSVDRTLLQQWSS--IKRIFYPNDKDMAD 86 (222)
Q Consensus 10 ~~~~Ii~nG~~~~~~~~~~~~~-~~~iIavDgGa~~l~~~~i~Pd~iiGDfDSi~~~~~~~~~~--~~~i~~~~dkD~TD 86 (222)
+.+.|++||+ ..++.....+ .+++||||||+++|+++|+.||++||||||++++.++++++ .+++++++|||+||
T Consensus 3 ~~i~ilaGGp--~~~~~~~~~~~~~~~IavDgGa~~l~~~gi~Pd~iiGDfDSi~~~~~~~~~~~~~~~i~~~~dKD~TD 80 (227)
T 3cq9_A 3 TIVNLLVGGP--TANYPADLTTIPGPWVGADRGALRLVKRGIQPVMVVGDFDSIDAAELQTVKDALVGAIVVKPDQDHTD 80 (227)
T ss_dssp CEEEEECSSC--GGGCSSCGGGSCSCEEEETHHHHHHHHTTCCCSEEESCC---------CHHHHHHTSEEECCCSSSCH
T ss_pred CEEEEEECCC--CHHHHHHHHHCCCCEEEECHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHCCCCEEECCCCCCCCH
T ss_conf 5899998999--64748988632791999882899999879985989756889985787898854986898785567666
Q ss_pred HHHHHHHHHHC-CCCEEEEEECCCCCCHHHHHHHHHHHHHHH--HCCCEEEEEECCCEEEEEECCCEEEEEC-CCEEEEE
Q ss_conf 89999999975-997599995378781247889999999886--2698199994891899996795699705-9808999
Q gi|254781122|r 87 GEIAVHKALQS-GARNIILVGSISGQRFDYALQHITLATSLK--KKNINVTLTSGIEEVFILVPGKHSFDLP-ENSVFSI 162 (222)
Q Consensus 87 ~ekAL~~~~~~-~~~~i~i~gg~~G~R~DH~lani~~L~~~~--~~~~~i~l~~~~~~i~~l~~g~~~~~~~-~g~~~Sl 162 (222)
+||||++|.++ ++++++++|+ +|||+||+|+|+++|+++. ..+.++.++++++.++++.+|.+.+..+ .++++|+
T Consensus 81 ~ekAl~~~~~~~~~~~I~i~G~-~GgR~DH~lanl~~l~~~~~~~~~~~i~l~d~~~~i~~l~~g~~~~~~~~~~~~iSl 159 (227)
T 3cq9_A 81 TQLAIKSIFEQLQPDEVHLYGA-TGGRLDHLLANMWLVLDPVFRQWAPQIKLIDKQNSVRFFLPGDYQITKEADKRYLAF 159 (227)
T ss_dssp HHHHHHHHHHHTCCSEEEEESC-SSSCHHHHHHHHSGGGSHHHHTTGGGEEEECSSEEEEEECSEEEEEECCTTCCEEEE
T ss_pred HHHHHHHHHHHCCCCEEEEEEC-CCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEECCCEEEEECCCCCEEEE
T ss_conf 9999999874459987999944-789776899999999877762369619999799599999589769983589738999
Q ss_pred EECCCCCEEEEECEEEECCCCEECCCCCEEEEEEECCC-EEEEEECCEEEEEECCCCC
Q ss_conf 75157762573041665378785278753884998495-7999957909999744100
Q gi|254781122|r 163 VCLEDIENITITGAKYTLSHHSLSLGSSRAVSNVVTKN-LTIMLDQGLAILISRPYDL 219 (222)
Q Consensus 163 ~p~~~~~~vt~~Glky~L~~~~l~~~~~~~~SN~~~~~-~~I~~~~G~llvi~~~kd~ 219 (222)
+|+++ ++||++||||||+++.+.+ +.+|+||++.++ ++|++++|.++|| +|||-
T Consensus 160 ~p~~~-~~vt~~Glky~L~~~~l~~-~~~giSNe~~~~~~~I~~~~G~llvi-~srD~ 214 (227)
T 3cq9_A 160 VPLMP-MHLTLPDEKYQLDAAYNAY-PISWASNEFSGNTGHFSFDAGVLAVI-QSRDD 214 (227)
T ss_dssp EESSC-EEEEESSBSSCEEEEEESS-CCCEEEECBSSSEEEEEECSSCEEEE-EECC-
T ss_pred EECCC-EEEEEECCEEECCCCCCCC-CCCCEEEEEECCEEEEEECCCEEEEE-EECCH
T ss_conf 83366-0799857683157744559-98627258999869999878889999-97548