HHsearch results for GI: 254781122 and protein with PDBid: 3k94_A
>3k94_A Thiamin pyrophosphokinase; structural genomics, PSI-2, protein structure initiative; 2.10A {Geobacillus thermodenitrificans ng80-2}
Probab=100.00 E-value=0 Score=361.83 Aligned_cols=208 Identities=23% Similarity=0.301 Sum_probs=181.6
Q ss_pred EEEEEEECCCCCCCHHHHHHHC-CCCEEEEEHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHCC--CCEEEECCCCCCCH
Q ss_conf 0699998779998168898513-49499991888999988997349997211299889974031--88599205677794
Q gi|254781122|r 10 IDFAILLNGDIRVTNRLLCAIE-SCKVIAADGGICHASQLKVVPELWIGDFDSVDRTLLQQWSS--IKRIFYPNDKDMAD 86 (222)
Q Consensus 10 ~~~~Ii~nG~~~~~~~~~~~~~-~~~iIavDgGa~~l~~~~i~Pd~iiGDfDSi~~~~~~~~~~--~~~i~~~~dkD~TD 86 (222)
|.++|++||+.+..+.+....+ ...+||||||+++|+++|++||++||||||++++.+++++. .+.+++|||||+||
T Consensus 1 m~i~Ii~gg~~~~~~~l~~~~~~~~~~IaaDgGa~~l~~~gi~Pd~iiGDfDSi~~~~~~~~~~~~~~~~~~~~dKD~TD 80 (223)
T 3k94_A 1 MIIHIVGGGPRELLPDLRFYDGEDVCWVGVDRGTMTLLEAGFRPVRAFGDFDSLPAEDVVKLQQAFPDLDVWPAEKDKTD 80 (223)
T ss_dssp CEEEEECSSCGGGSCCGGGGCCTTEEEEEETTHHHHHHHHTCCCSEEESCGGGSCHHHHHHHHHHCTTCCEECCBTTBCH
T ss_pred CEEEEEECCCCCCCHHHHHHCCCCCEEEEECHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHCCCEEEECCHHHCCCH
T ss_conf 98999968995427335651044888999982899999879986889857887864788999844975898584757577
Q ss_pred HHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEEECCCEEEE-ECCCEEEEEEEC
Q ss_conf 8999999997599759999537878124788999999988626981999948918999967956997-059808999751
Q gi|254781122|r 87 GEIAVHKALQSGARNIILVGSISGQRFDYALQHITLATSLKKKNINVTLTSGIEEVFILVPGKHSFD-LPENSVFSIVCL 165 (222)
Q Consensus 87 ~ekAL~~~~~~~~~~i~i~gg~~G~R~DH~lani~~L~~~~~~~~~i~l~~~~~~i~~l~~g~~~~~-~~~g~~~Sl~p~ 165 (222)
+||||++|.++++++++++|| +|||+||+|+|+++|++|.++ .+.++++++.++++.+|.+.+. .++++++|++|+
T Consensus 81 ~ekAl~~a~~~~~~~i~i~Ga-~GgR~DH~lanl~~L~~~~~~--~i~i~~~~~~~~~~~~g~~~~~~~~~g~~iSlipl 157 (223)
T 3k94_A 81 MEIALDWAVEQTARCIRLFGA-TGGRLDHLFGNVELLLKYADR--PIEIVDRQNVLTVHLPGTYTVMYDARYCYVSYIPV 157 (223)
T ss_dssp HHHHHHHHHTTCCSEEEEESC-SSSSHHHHHHHHHHHHHTTTS--CEEEEETTEEEEEECSEEEEEECCTTCCEEEEEEC
T ss_pred HHHHHHHHHHCCCCEEEEECC-CCCCHHHHHHHHHHHHHHHHC--CEEEEECCCEEEEECCCCEEEEECCCCCEEEECCC
T ss_conf 999999998749998999716-899776999999999988639--39999559889998799779970687525886247
Q ss_pred C-CCCEEEEECEEEECCCCEECCCCCEEEEEEECCC-EEEEEECCEEEEEECCCCCCC
Q ss_conf 5-7762573041665378785278753884998495-799995790999974410024
Q gi|254781122|r 166 E-DIENITITGAKYTLSHHSLSLGSSRAVSNVVTKN-LTIMLDQGLAILISRPYDLQR 221 (222)
Q Consensus 166 ~-~~~~vt~~Glky~L~~~~l~~~~~~~~SN~~~~~-~~I~~~~G~llvi~~~kd~~~ 221 (222)
+ ++++||++||||||++++|++++++|+||++.++ ++|++++|.++|| ++||-.-
T Consensus 158 ~~~~~~vt~~Glky~L~~~~l~~~~~~giSN~~~~~~v~Is~~~G~llvi-~s~D~~~ 214 (223)
T 3k94_A 158 SETVAEFTLTGFKYPLTNCHISRGSTLCISNELIQSSGTFSFSEGILMMI-RSSDSSC 214 (223)
T ss_dssp SSEEEEEEEESBSSCCCSEEEETTTSCCBCCCBCSSEEEEEESBSCEEEE-EECCTTC
T ss_pred CCCCCEEEECCCEEECCCCEECCCCCCEEEEEEECCEEEEEECCCEEEEE-EEECHHH
T ss_conf 78713499369798789968528997268579989849999888989999-9824306