HHsearch results for GI: 254781122 and protein with PDBid: 3l8m_A
>3l8m_A Probable thiamine pyrophosphokinase; thiamin diphosphate biosynthetic process, ATP binding, structural genomics, PSI-2; 2.40A {Staphylococcus saprophyticus}
Probab=100.00 E-value=0 Score=371.18 Aligned_cols=206 Identities=24% Similarity=0.339 Sum_probs=183.4
Q ss_pred EEEEEEECCCCCCCHHHHHHHCCCCEEEEEHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHCC-CCEEEECCCCCCCHHH
Q ss_conf 069999877999816889851349499991888999988997349997211299889974031-8859920567779489
Q gi|254781122|r 10 IDFAILLNGDIRVTNRLLCAIESCKVIAADGGICHASQLKVVPELWIGDFDSVDRTLLQQWSS-IKRIFYPNDKDMADGE 88 (222)
Q Consensus 10 ~~~~Ii~nG~~~~~~~~~~~~~~~~iIavDgGa~~l~~~~i~Pd~iiGDfDSi~~~~~~~~~~-~~~i~~~~dkD~TD~e 88 (222)
|+++|++||+.++.+.+.+ .+.+++|||||||++|+++|+.||++||||||++++.+++++. ...++++||||+||+|
T Consensus 1 Mk~~ii~gg~~~p~~~~~~-~~~d~iIa~DgGa~~l~~~gi~Pd~ivGDfDSi~~~~~~~~~~~~~~~~~~~dkd~TD~e 79 (212)
T 3l8m_A 1 MKANLLCGNRNLPKHILVE-HKHEHWIGIDRGTLILLESGITPQFAVGDFDSISDSERNFIQQQIEINPYNSEKDDTDLA 79 (212)
T ss_dssp CEEEEECCSSSCCTTHHHH-TTTSEEEEETHHHHHHHHTTCCCSEEESCCCCSCHHHHHHHHHHTBCCCCC---CBCHHH
T ss_pred CEEEEEECCCCCCHHHHHH-CCCCEEEEECHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHCCCEEEECCCCCCHHHHH
T ss_conf 9899996899899899964-449889998448999998799859897178999868999986597099878878713999
Q ss_pred HHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHH--HHCCCEEEEEECCCEEEEEECCCEEEE-ECCCEEEEEEEC
Q ss_conf 99999997599759999537878124788999999988--626981999948918999967956997-059808999751
Q gi|254781122|r 89 IAVHKALQSGARNIILVGSISGQRFDYALQHITLATSL--KKKNINVTLTSGIEEVFILVPGKHSFD-LPENSVFSIVCL 165 (222)
Q Consensus 89 kAL~~~~~~~~~~i~i~gg~~G~R~DH~lani~~L~~~--~~~~~~i~l~~~~~~i~~l~~g~~~~~-~~~g~~~Sl~p~ 165 (222)
|||++|.++++++++++|| +|||+||+|||+++|.++ ...+.+++++++++.++++.+|.+.+. .+.++++|++|+
T Consensus 80 kAl~~~~~~~~~~I~i~G~-~GgR~DH~lanl~~L~~~~~~~~~~~i~l~~~~~~i~~l~~g~~~~~~~~~~~~~Sl~p~ 158 (212)
T 3l8m_A 80 LGIDQAVKRGYRNIDVYGA-TGGRLDHFMGALQILEKPEYAKMNINIKLIDDTNEIQFIQKGQFNVTYSEQFPYISFIPV 158 (212)
T ss_dssp HHHHHHHHTTCCEEEEESC-SSSCHHHHHHHHHHHTCHHHHTTTCEEEEECSSEEEEEECSEEECC-----CCEEEEEEC
T ss_pred HHHHHHHHCCCCEEEEECC-CCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEEECCCEEEECCCCCCEEEEEEC
T ss_conf 9999998669987999857-667742799999999866652239618999599499999189438865888756898633
Q ss_pred CCCCEEEEECEEEECCCCEECCCCCEEEEEEECCC-EEEEEECCEEEEEECCCC
Q ss_conf 57762573041665378785278753884998495-799995790999974410
Q gi|254781122|r 166 EDIENITITGAKYTLSHHSLSLGSSRAVSNVVTKN-LTIMLDQGLAILISRPYD 218 (222)
Q Consensus 166 ~~~~~vt~~Glky~L~~~~l~~~~~~~~SN~~~~~-~~I~~~~G~llvi~~~kd 218 (222)
+++++||++||||||++++|++++++|+||++.++ ++|++++|.+++| +|||
T Consensus 159 ~~~~~vt~~Glky~L~~~~l~~g~~~giSN~~~~~~~~I~~~~G~llvi-~s~D 211 (212)
T 3l8m_A 159 IYPTVISLKGFKYNLQNETLKLGSTLTISNELSQSCGNIEIIEGSVLMI-RSKD 211 (212)
T ss_dssp C-CEEEESSSSCCSSEEC-------CCTTBCC---CCCEEEEESCEEEE-EECC
T ss_pred CCCCEEECCCCEEECCCCEECCCCCCEEEEEEECCEEEEEECCCEEEEE-EECC
T ss_conf 5663698259883379954238997365238989838999778989999-9778