RPSBLAST alignment of GI: 254781122 and protein with PDBid: 3lm8

>3lm8_A Thiamine pyrophosphokinase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: VIB; 2.60A {Bacillus subtilis} Length = 222

 Score =  142 bits (360), Expect = 5e-35
 Identities = 58/215 (26%), Positives = 96/215 (44%), Gaps = 8/215 (3%)

Query: 12  FAILLNGDIRVTNRLLCAIESCK-VIAADGGICHASQLKVVPELWIGDFDSVDRTLLQQW 70
             I+  G   +   L    +     I  D G        ++P    GDFDS+     ++ 
Sbjct: 4   INIVAGGPKNLIPDLTGYTDEHTLWIGVDKGTVTLLDAGIIPVEAFGDFDSITEQERRRI 63

Query: 71  SS--IKRIFYPNDKDMADGEIAVHKALQSGARNIILVGSISGQRFDYALQHITLATSLKK 128
                    Y  +KD  D ++A+  AL+     I + G I+G R D+ L +I L     K
Sbjct: 64  EKAAPALHVYQAEKDQTDLDLALDWALEKQPDIIQIFG-ITGGRADHFLGNIQLLYKGVK 122

Query: 129 KNINVTLTSGIEEVFILVPGKHSFDLPENS--VFSIVCLEDIENITITGAKYTLSHHSLS 186
            NI + L      + +  PG++  +  EN   +  I   EDI  +T+TG KY L++  ++
Sbjct: 123 TNIKIRLIDKQNHIQMFPPGEYDIEKDENKRYISFIPFSEDIHELTLTGFKYPLNNCHIT 182

Query: 187 LGSSRAVSNVVTKN-LTIMLDQGLAILISRPYDLQ 220
           LGS+  +SN +  +  T    +G+ I+I R  DL+
Sbjct: 183 LGSTLCISNELIHSRGTFSFVKGILIMI-RSTDLE 216