RPSBLAST alignment for GI: 254781123 and conserved domain: TIGR01257

>gnl|CDD|130324 TIGR01257, rim_protein, retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease. Length = 2272
 Score = 50.0 bits (119), Expect = 2e-06
 Identities = 55/197 (27%), Positives = 81/197 (41%), Gaps = 24/197 (12%)

Query: 284  VLEADKITKQYD-------DRLVVKDFSLRIHYGECIGIVGPNGAGKTTLLKLLTGKIKP 336
            +L  +++TK Y        DRL V      +  GEC G++G NGAGKTT  K+LTG    
Sbjct: 1937 ILRLNELTKVYSGTSSPAVDRLCVG-----VRPGECFGLLGVNGAGKTTTFKMLTGDTTV 1991

Query: 337  DCGFITLGTNLKIATIDQKREDID--PD-KSLASYLTGSSGDSLMVR------GESRHVA 387
              G  T+     +  I    +++   P   ++   LTG     L  R       E   VA
Sbjct: 1992 TSGDATVAGKSILTNISDVHQNMGYCPQFDAIDDLLTGREHLYLYARLRGVPAEEIEKVA 2051

Query: 388  GYIKDFLFHPDQAHSLMKHLSGGEKMRAIVARVLAQPFNFLIMDEPTNDLDFETLDFLER 447
             +    L     A  L    SGG K +   A  L      +++DEPT  +D +    L  
Sbjct: 2052 NWSIQSLGLSLYADRLAGTYSGGNKRKLSTAIALIGCPPLVLLDEPTTGMDPQARRMLWN 2111

Query: 448  TITQL---QGTILIVSH 461
            TI  +      +++ SH
Sbjct: 2112 TIVSIIREGRAVVLTSH 2128