RPSBLAST alignment for GI: 254781123 and conserved domain: TIGR01257

>gnl|CDD|130324 TIGR01257, rim_protein, retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease. Length = 2272
 Score = 40.0 bits (93), Expect = 0.002
 Identities = 45/192 (23%), Positives = 80/192 (41%), Gaps = 31/192 (16%)

Query: 297  RLVVKDFSLRIHYGECIGIVGPNGAGKTTLLKLLTGKIKPDCGFITLGTNLKIATIDQKR 356
            R  V   ++  +  +    +G NGAGKTT L +LTG + P  G + +G       +D  R
Sbjct: 943  RPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLPPTSGTVLVGGKDIETNLDAVR 1002

Query: 357  EDID--PDKSLA-------------SYLTGSSGDSLMVRGESRHVAGYIKDFLFHPDQAH 401
            + +   P  ++              + L G S +   +  E+      ++D   H  + +
Sbjct: 1003 QSLGMCPQHNILFHHLTVAEHILFYAQLKGRSWEEAQLEMEA-----MLEDTGLH-HKRN 1056

Query: 402  SLMKHLSGGEKMRAIVARVLAQPFNFLIMDEPTNDLDFETLDFLERTITQL------QGT 455
               + LSGG + +  VA         +++DEPT+ +D     +  R+I  L        T
Sbjct: 1057 EEAQDLSGGMQRKLSVAIAFVGDAKVVVLDEPTSGVD----PYSRRSIWDLLLKYRSGRT 1112

Query: 456  ILIVSHDRDFLD 467
            I++ +H  D  D
Sbjct: 1113 IIMSTHHMDEAD 1124