RPSBLAST alignment for GI: 254781123 and conserved domain: TIGR02203
>gnl|CDD|131258 TIGR02203, MsbA_lipidA, lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes. Length = 571
Score = 70.5 bits (173), Expect = 1e-12
Identities = 58/200 (29%), Positives = 96/200 (48%), Gaps = 27/200 (13%)
Query: 285 LEADKITKQY--DDRLVVKDFSLRIHYGECIGIVGPNGAGKTTLLKLLTGKIKPDCGFIT 342
+E +T +Y DR + SL I GE + +VG +G+GK+TL+ L+ +PD G I
Sbjct: 331 VEFRNVTFRYPGRDRPALDSISLVIEPGETVALVGRSGSGKSTLVNLIPRFYEPDSGQIL 390
Query: 343 L-GTNLKIATIDQKREDIDP--------DKSLASYLT-GSSGDSLMVRGESRHVAGYIKD 392
L G +L T+ R + + ++A+ + G + + E A Y +D
Sbjct: 391 LDGHDLADYTLASLRRQVALVSQDVVLFNDTIANNIAYGRTEQADRAEIERALAAAYAQD 450
Query: 393 FLFH-PDQAHSLM----KHLSGGEKMRAIVARVLAQPFNFLIMDEPTNDLDFETLDFLER 447
F+ P + + LSGG++ R +AR L + LI+DE T+ LD E+ ER
Sbjct: 451 FVDKLPLGLDTPIGENGVLLSGGQRQRLAIARALLKDAPILILDEATSALDNES----ER 506
Query: 448 TITQ-----LQG-TILIVSH 461
+ +QG T L+++H
Sbjct: 507 LVQAALERLMQGRTTLVIAH 526