RPSBLAST alignment for GI: 254781123 and conserved domain: TIGR02203
>gnl|CDD|131258 TIGR02203, MsbA_lipidA, lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes. Length = 571
Score = 62.8 bits (153), Expect = 2e-10
Identities = 47/175 (26%), Positives = 73/175 (41%), Gaps = 32/175 (18%)
Query: 6 LRLDHISATIGG--IDLLQDVCLSIKPKERICLVGCNGSGKSTLLKIAAGITEPQSGNVF 63
+ +++ G L + L I+P E + LVG +GSGKSTL+ + EP SG +
Sbjct: 331 VEFRNVTFRYPGRDRPALDSISLVIEPGETVALVGRSGSGKSTLVNLIPRFYEPDSGQIL 390
Query: 64 LHSSSRLGYLEQNPDL-SHFSTISQYI---DDTIKDTIEAPYSPYSLLKKFNLRE----- 114
L Y L + +SQ + +DTI + I Y + +
Sbjct: 391 LDGHDLADYTLA--SLRRQVALVSQDVVLFNDTIANNIA--YGRTEQADRAEIERALAAA 446
Query: 115 --QDRIE---------------NLSVGQTRCVALMKMLISRPDILILDEPTNHLD 152
QD ++ LS GQ + +A+ + L+ ILILDE T+ LD
Sbjct: 447 YAQDFVDKLPLGLDTPIGENGVLLSGGQRQRLAIARALLKDAPILILDEATSALD 501