RPSBLAST alignment for GI: 254781123 and conserved domain: TIGR02211

>gnl|CDD|131266 TIGR02211, LolD_lipo_ex, lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina. Length = 221
 Score = 83.9 bits (208), Expect = 1e-16
 Identities = 56/198 (28%), Positives = 89/198 (44%), Gaps = 37/198 (18%)

Query: 18  IDLLQDVCLSIKPKERICLVGCNGSGKSTLLKIAAGITEPQSGNVFLH-------SSSRL 70
             +L+ V LSI   E + +VG +GSGKSTLL +  G+  P SG V  +       SS+  
Sbjct: 18  TRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPTSGEVLFNGQSLSKLSSNER 77

Query: 71  GYLEQNPDLSHFSTISQY----IDDTI------------KDTIEAPYSPYSLLKKFNLRE 114
             L           I Q+     D T             K   EA    Y +L+K  L  
Sbjct: 78  AKLRN----KKLGFIYQFHHLLPDFTALENVAMPLLIGKKSVKEAKERAYEMLEKVGL-- 131

Query: 115 QDRIEN----LSVGQTRCVALMKMLISRPDILILDEPTNHLDFRTIHWMEQELLKINS-- 168
           + RI +    LS G+ + VA+ + L+++P +++ DEPT +LD      +   +L++N   
Sbjct: 132 EHRINHRPSELSGGERQRVAIARALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNREL 191

Query: 169 --ALIFVSHDRRFLETLS 184
             + + V+HD    + L 
Sbjct: 192 NTSFLVVTHDLELAKKLD 209