RPSBLAST alignment for GI: 254781123 and conserved domain: TIGR03269

>gnl|CDD|132313 TIGR03269, met_CoM_red_A2, methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2. Length = 520

 Score = 71.4 bits (175), Expect = 7e-13
 Identities = 62/216 (28%), Positives = 102/216 (47%), Gaps = 30/216 (13%)

Query: 281 GKLVLEADKITKQY--DDRLVVK---DFSLRIHYGECIGIVGPNGAGKTTLLKLLTGKIK 335
           G+ +++   ++K+Y   DR VVK   + SL +  GE  GIVG +GAGKTTL K++ G ++
Sbjct: 276 GEPIIKVRNVSKRYISVDRGVVKAVDNVSLEVKEGEIFGIVGTSGAGKTTLSKIIAGVLE 335

Query: 336 P-----------------DCGFITLGTNLKIATIDQKREDIDPDKSLASYLTGSSGDSLM 378
           P                   G    G   +   I  +  D+ P +++   LT + G  L 
Sbjct: 336 PTSGEVNVRVGDEWVDMTKPGPDGRGRAKRYIGILHQEYDLYPHRTVLDNLTEAIGLELP 395

Query: 379 VRGESRHVAGYIKDFLFHPDQAHSLMK----HLSGGEKMRAIVARVLAQPFNFLIMDEPT 434
                      +K   F  ++A  ++      LS GE+ R  +A+VL +    +I+DEPT
Sbjct: 396 DELARMKAVITLKMVGFDEEKAEEILDKYPDELSEGERHRVALAQVLIKEPRIVILDEPT 455

Query: 435 NDLDFETLDFLERTI----TQLQGTILIVSHDRDFL 466
             +D  T   +  +I     +++ T +IVSHD DF+
Sbjct: 456 GTMDPITKVDVTHSILKAREEMEQTFIIVSHDMDFV 491