RPSBLAST alignment for GI: 254781123 and conserved domain: TIGR01842

>gnl|CDD|162555 TIGR01842, type_I_sec_PrtD, type I secretion system ABC transporter, PrtD family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. Length = 544

 Score = 65.1 bits (159), Expect = 6e-11
 Identities = 48/181 (26%), Positives = 82/181 (45%), Gaps = 31/181 (17%)

Query: 1   MSLP----ILRLDHISAT--IGGIDLLQDVCLSIKPKERICLVGCNGSGKSTLLKIAAGI 54
           M LP     L +++++     G    L+ +   ++  E + ++G +GSGKSTL ++  GI
Sbjct: 308 MPLPEPEGHLSVENVTIVPPGGKKPTLRGISFRLQAGEALAIIGPSGSGKSTLARLIVGI 367

Query: 55  TEPQSGNVFLHSSS-----------RLGYLEQNPDLSHFS-TISQYI---DDTIKD--TI 97
             P SG+V L  +             +GYL Q+ +L  F  T+++ I    +       I
Sbjct: 368 WPPTSGSVRLDGADLKQWDRETFGKHIGYLPQDVEL--FPGTVAENIARFGENADPEKII 425

Query: 98  EAPYSP------YSLLKKFNLREQDRIENLSVGQTRCVALMKMLISRPDILILDEPTNHL 151
           EA            L   ++         LS GQ + +AL + L   P +++LDEP ++L
Sbjct: 426 EAAKLAGVHELILRLPDGYDTVIGPGGATLSGGQRQRIALARALYGDPKLVVLDEPNSNL 485

Query: 152 D 152
           D
Sbjct: 486 D 486