RPSBLAST alignment for GI: 254781123 and conserved domain: TIGR01846
>gnl|CDD|162558 TIGR01846, type_I_sec_HlyB, type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. Length = 694
Score = 58.6 bits (142), Expect = 5e-09
Identities = 63/230 (27%), Positives = 99/230 (43%), Gaps = 39/230 (16%)
Query: 20 LLQDVCLSIKPKERICLVGCNGSGKSTLLKIAAGITEPQSGNVFLHSSSRLGYLEQNPDL 79
+L ++ L IKP E I +VG +GSGKSTL K+ + PQ G V L L +
Sbjct: 472 VLSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRLYTPQHGQV-LVDGVDLAIADPAWLR 530
Query: 80 SHFSTISQ---YIDDTIKDTIEA--PYSPYS-----------------LLKKFNLREQDR 117
+ Q +I+D I P +P+ L + +N ++
Sbjct: 531 RQMGVVLQENVLFSRSIRDNIALCNPGAPFEHVIHAAKLAGAHDFISELPQGYNTEVGEK 590
Query: 118 IENLSVGQTRCVALMKMLISRPDILILDEPTNHLDFRTIHWMEQELLKI--NSALIFVSH 175
NLS GQ + +A+ + L+ P ILI DE T+ LD+ + + + + +I +I ++H
Sbjct: 591 GANLSGGQRQRIAIARALVGNPRILIFDEATSALDYESEALIMRNMREICRGRTVIIIAH 650
Query: 176 DRRFLETLSTTTVWLDRGC--LHHLDQGFAYFESWKKNILQQEQIRYHNL 223
LST R C + L++G ES + L Q Y L
Sbjct: 651 ------RLSTV-----RACDRIIVLEKG-QIAESGRHEELLALQGLYARL 688