RPSBLAST alignment for GI: 254781123 and conserved domain: TIGR01846

>gnl|CDD|162558 TIGR01846, type_I_sec_HlyB, type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. Length = 694

 Score = 57.4 bits (139), Expect = 9e-09
 Identities = 54/179 (30%), Positives = 87/179 (48%), Gaps = 16/179 (8%)

Query: 299 VVKDFSLRIHYGECIGIVGPNGAGKTTLLKLLTGKIKPDCGFITL-GTNLKIATIDQKRE 357
           V+ + +L I  GE IGIVGP+G+GK+TL KLL     P  G + + G +L IA     R 
Sbjct: 472 VLSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRLYTPQHGQVLVDGVDLAIADPAWLRR 531

Query: 358 DIDPDKSLASYLTGSSGDSL------MVRGESRHVAGY--IKDFLFHPDQAHS--LMKH- 406
            +          + S  D++             H A      DF+    Q ++  + +  
Sbjct: 532 QMGVVLQENVLFSRSIRDNIALCNPGAPFEHVIHAAKLAGAHDFISELPQGYNTEVGEKG 591

Query: 407 --LSGGEKMRAIVARVLAQPFNFLIMDEPTNDLDFETLDFLERTITQL-QG-TILIVSH 461
             LSGG++ R  +AR L      LI DE T+ LD+E+   + R + ++ +G T++I++H
Sbjct: 592 ANLSGGQRQRIAIARALVGNPRILIFDEATSALDYESEALIMRNMREICRGRTVIIIAH 650