RPSBLAST alignment for GI: 254781123 and conserved domain: TIGR02857

>gnl|CDD|163042 TIGR02857, CydD, thiol reductant ABC exporter, CydD subunit. Unfortunately, the gene symbol nomenclature adopted based on this operon in B. subtilis assigns cydC to the third gene in the operon where this gene is actually homologous to the E. coli cydD gene. We have chosen to name all homologs in this family in accordance with the precedence of publication of the E. coli name, CydD. Length = 529

 Score = 82.4 bits (204), Expect = 3e-16
 Identities = 53/211 (25%), Positives = 90/211 (42%), Gaps = 37/211 (17%)

Query: 2   SLPILRLDHISATIGGIDL--LQDVCLSIKPKERICLVGCNGSGKSTLLKIAAGITEPQS 59
             P L    +S    G     L+ V  ++ P ER+ LVG +G+GKSTLL +  G  +P  
Sbjct: 317 PAPSLEFSGLSVAYPGRRAPALRPVSFTVPPGERVALVGPSGAGKSTLLNLLLGFVDPTE 376

Query: 60  GNVFL-----------HSSSRLGYLEQNPDLSHFS-TISQYI--------DDTIKDTIEA 99
           G++ +               ++ ++ Q+P L  F+ TI++ I        D  I+  +E 
Sbjct: 377 GSIAVNGVPLADADADSWRDQIAWVPQHPFL--FAGTIAENIRLARPDASDAEIRRALER 434

Query: 100 PYSPY---SLLKKFNLREQDRIENLSVGQTRCVALMKMLISRPDILILDEPTNHLDFRTI 156
                   +L +  +    +    LS GQ + +AL +  +    +L+LDEPT HLD  T 
Sbjct: 435 AGLDEFVAALPQGLDTLIGEGGAGLSGGQAQRLALARAFLRDAPLLLLDEPTAHLDAET- 493

Query: 157 HWMEQELLKI------NSALIFVSHDRRFLE 181
              E  + +          ++ V+H     E
Sbjct: 494 ---EALVTEALRALAQGRTVLLVTHRLALAE 521