RPSBLAST alignment for GI: 254781123 and conserved domain: TIGR03608
>gnl|CDD|163352 TIGR03608, L_ocin_972_ABC, putative bacteriocin export ABC transporter, lactococcin 972 group. A gene pair with a fairly wide distribution consists of a polypeptide related to the lactococcin 972 (see TIGR01653) and multiple-membrane-spanning putative immunity protein (see TIGR01654). This model represents a small clade within the ABC transporters that regularly are found adjacent to these bacteriocin system gene pairs and are likely serve as export proteins. Length = 206
Score = 72.6 bits (179), Expect = 2e-13
Identities = 48/200 (24%), Positives = 86/200 (43%), Gaps = 37/200 (18%)
Query: 290 ITKQYDDRLVVKDFSLRIHYGECIGIVGPNGAGKTTLLKLLTGKIKPDCGFITL-GTNLK 348
I+K++ D++++ D +L I G+ I+G +G+GK+TLL ++ K D G + L G
Sbjct: 4 ISKKFGDKIILDDLNLTIEKGKMYAIIGESGSGKSTLLNIIGLLEKFDSGQVYLNGKETP 63
Query: 349 IATIDQKR-------------------EDIDPDKSLA---SYLTGSSGDSLMVRG-ESRH 385
+ E ++ + L L+ E
Sbjct: 64 PLNSKKASKFRREKLGYLFQNFALIENETVEENLDLGLKYKKLSKKEKREKKKEALEKVG 123
Query: 386 VAGYIKDFLFHPDQAHSLMKHLSGGEKMRAIVARVLAQPFNFLIMDEPTNDLDFETLDFL 445
+ +K ++ LSGGE+ R +AR + + ++ DEPT LD + D +
Sbjct: 124 LNLKLKQKIY----------ELSGGEQQRVALARAILKDPPLILADEPTGSLDPKNRDEV 173
Query: 446 ERTITQL--QG-TILIVSHD 462
+ +L +G TI+IV+HD
Sbjct: 174 LDLLLELNDEGKTIIIVTHD 193