RPSBLAST alignment for GI: 254781123 and conserved domain: PRK12608

>gnl|CDD|183622 PRK12608, PRK12608, transcription termination factor Rho; Provisional. Length = 380
 Score = 46.2 bits (110), Expect = 2e-05
 Identities = 48/209 (22%), Positives = 78/209 (37%), Gaps = 38/209 (18%)

Query: 192 RGCLHHLDQGFAYFESWKKNILQQE--------QIRYHNLKKKNEAEKEWLRYGVTAR-R 242
            G L  L  GF +  S ++N L            IR  NL+  +  E          R R
Sbjct: 20  LGVLEILGDGFGFLRSARRNYLPSPDDVFVPPALIRRFNLRTGDVVEGV-----ARPRER 74

Query: 243 KRNVRRVKELHEIQKQLQEQKKSFHSTIQTHLQTTQSSGKLVLEADKITKQYDDRLVVKD 302
            R + RV  ++    +   ++  F      H +      +L LE    +     R+V  D
Sbjct: 75  YRVLVRVDSVNGTDPEKLARRPHFDDLTPLHPRE-----RLRLETG--SDDLSMRVV--D 125

Query: 303 FSLRIHYGECIGIVGPNGAGKTTLLKLLTGKI---KPDCGFITLGTNLKIATIDQKREDI 359
               I  G+   IV P  AGKT LL+ +   +    P+   + L        ID++ E++
Sbjct: 126 LVAPIGKGQRGLIVAPPRAGKTVLLQQIAAAVAANHPEVHLMVL-------LIDERPEEV 178

Query: 360 -DPDKSLASYLTGSSGDSLMVRGESRHVA 387
            D  +S+   +  S+ D    R    H+ 
Sbjct: 179 TDMRRSVKGEVYASTFD----RPPDEHIR 203