RPSBLAST alignment for GI: 254781123 and conserved domain: PRK12608
>gnl|CDD|183622 PRK12608, PRK12608, transcription termination factor Rho; Provisional. Length = 380
Score = 46.2 bits (110), Expect = 2e-05
Identities = 48/209 (22%), Positives = 78/209 (37%), Gaps = 38/209 (18%)
Query: 192 RGCLHHLDQGFAYFESWKKNILQQE--------QIRYHNLKKKNEAEKEWLRYGVTAR-R 242
G L L GF + S ++N L IR NL+ + E R R
Sbjct: 20 LGVLEILGDGFGFLRSARRNYLPSPDDVFVPPALIRRFNLRTGDVVEGV-----ARPRER 74
Query: 243 KRNVRRVKELHEIQKQLQEQKKSFHSTIQTHLQTTQSSGKLVLEADKITKQYDDRLVVKD 302
R + RV ++ + ++ F H + +L LE + R+V D
Sbjct: 75 YRVLVRVDSVNGTDPEKLARRPHFDDLTPLHPRE-----RLRLETG--SDDLSMRVV--D 125
Query: 303 FSLRIHYGECIGIVGPNGAGKTTLLKLLTGKI---KPDCGFITLGTNLKIATIDQKREDI 359
I G+ IV P AGKT LL+ + + P+ + L ID++ E++
Sbjct: 126 LVAPIGKGQRGLIVAPPRAGKTVLLQQIAAAVAANHPEVHLMVL-------LIDERPEEV 178
Query: 360 -DPDKSLASYLTGSSGDSLMVRGESRHVA 387
D +S+ + S+ D R H+
Sbjct: 179 TDMRRSVKGEVYASTFD----RPPDEHIR 203