RPSBLAST alignment for GI: 254781123 and conserved domain: cd03219
>gnl|CDD|72978 cd03219, ABC_Mj1267_LivG_branched, The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).. Length = 236
Score = 87.4 bits (217), Expect = 1e-17
Identities = 56/221 (25%), Positives = 94/221 (42%), Gaps = 31/221 (14%)
Query: 6 LRLDHISATIGGIDLLQDVCLSIKPKERICLVGCNGSGKSTLLKIAAGITEPQSGNVFL- 64
L + ++ GG+ L DV S++P E L+G NG+GK+TL + +G P SG+V
Sbjct: 1 LEVRGLTKRFGGLVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPTSGSVLFD 60
Query: 65 ---------HSSSRLGYLE--QN----PDLS---------HFSTISQYIDDTIKDTI-EA 99
H +RLG Q P+L+ T S + + EA
Sbjct: 61 GEDITGLPPHEIARLGIGRTFQIPRLFPELTVLENVMVAAQARTGSGLLLARARREEREA 120
Query: 100 PYSPYSLLKKFNL--REQDRIENLSVGQTRCVALMKMLISRPDILILDEPTNHLDFRTIH 157
LL++ L LS GQ R + + + L + P +L+LDEP L+
Sbjct: 121 RERAEELLERVGLADLADRPAGELSYGQQRRLEIARALATDPKLLLLDEPAAGLNPEETE 180
Query: 158 WMEQELLKINS---ALIFVSHDRRFLETLSTTTVWLDRGCL 195
+ + + ++ ++ V HD + +L+ LD+G +
Sbjct: 181 ELAELIRELRERGITVLLVEHDMDVVMSLADRVTVLDQGRV 221