RPSBLAST alignment for GI: 254781123 and conserved domain: cd03224
>gnl|CDD|72983 cd03224, ABC_TM1139_LivF_branched, LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.. Length = 222
Score = 71.6 bits (176), Expect = 5e-13
Identities = 58/200 (29%), Positives = 91/200 (45%), Gaps = 25/200 (12%)
Query: 285 LEADKITKQYDDRLVVKDFSLRIHYGECIGIVGPNGAGKTTLLKLLTGKIKPDCGFITLG 344
LE + + Y ++ SL + GE + ++G NGAGKTTLLK + G + P G I
Sbjct: 1 LEVENLNAGYGKSQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPRSGSIRFD 60
Query: 345 ----TNLK--------IATIDQKREDIDPDKSLASYLTGSSGDSLMVRGESRHVAGYIKD 392
T L I + + R I P+ ++ L G R + + + +
Sbjct: 61 GRDITGLPPHERARAGIGYVPEGRR-IFPELTVEENLL--LGAYARRRAKRKARLERVYE 117
Query: 393 FLFHP---DQAHSLMKHLSGGEK-MRAIVARVLAQPFNFLIMDEPTNDLDFETLDFLERT 448
LF P ++ L LSGGE+ M AI AR L L++DEP+ L + ++ +
Sbjct: 118 -LF-PRLKERRKQLAGTLSGGEQQMLAI-ARALMSRPKLLLLDEPSEGLAPKIVEEIFEA 174
Query: 449 ITQLQG---TILIVSHDRDF 465
I +L+ TIL+V + F
Sbjct: 175 IRELRDEGVTILLVEQNARF 194