RPSBLAST alignment for GI: 254781123 and conserved domain: cd03279
>gnl|CDD|73038 cd03279, ABC_sbcCD, SbcCD and other Mre11/Rad50 (MR) complexes are implicated in the metabolism of DNA ends. They cleave ends sealed by hairpin structures and are thought to play a role in removing protein bound to DNA termini.. Length = 213
Score = 47.2 bits (112), Expect = 2e-05
Identities = 42/193 (21%), Positives = 66/193 (34%), Gaps = 41/193 (21%)
Query: 302 DFSLRIHYGECIGIVGPNGAGKTTLLKLLTGKIKPDCGFITLGTNLKIATIDQKREDIDP 361
DF+ + I GP GAGK+T+L +T + G + + R P
Sbjct: 21 DFTG-LDNNGLFLICGPTGAGKSTILDAIT--------YALYGKTPRYGRQENLRSVFAP 71
Query: 362 DKSLASY-LTGSSGDSLMVRGESRHV------------AGYIKDFLFHPDQAHSLMKHLS 408
+ A T G SR + G FL P + LS
Sbjct: 72 GEDTAEVSFTFQLGGKKYRVERSRGLDYDQFTRIVLLPQGEFDRFLARP------VSTLS 125
Query: 409 GGEKMRAIVARVLA----------QPFNFLIMDEPTNDLDFETLDFLERTITQLQGT--- 455
GGE A ++ LA L +DE LD E L+ + + ++
Sbjct: 126 GGETFLASLSLALALSEVLQNRGGARLEALFIDEGFGTLDPEALEAVATALELIRTENRM 185
Query: 456 ILIVSHDRDFLDR 468
+ ++SH + +R
Sbjct: 186 VGVISHVEELKER 198