RPSBLAST alignment for GI: 254781123 and conserved domain: cd03294
>gnl|CDD|73053 cd03294, ABC_Pro_Gly_Bertaine, This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.. Length = 269
Score = 66.7 bits (163), Expect = 2e-11
Identities = 55/197 (27%), Positives = 88/197 (44%), Gaps = 20/197 (10%)
Query: 287 ADKITKQYDDRLVVKDFSLRIHYGECIGIVGPNGAGKTTLLKLLTGKIKPDCGFITLGTN 346
++I K+ + V D SL + GE I+G +G+GK+TLL+ + I+P G + +
Sbjct: 27 KEEILKKTGQTVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPTSGKVLID-G 85
Query: 347 LKIATIDQK------REDID---------PDKSLASYLTGSSGDSLMVRGESRHVAGYIK 391
IA + +K R+ I P +++ + + R E A
Sbjct: 86 QDIAAMSRKELRELRRKKISMVFQSFALLPHRTVLENVAFGLEVQGVPRAEREERAAEAL 145
Query: 392 DFLFHPDQAHSLMKHLSGGEKMRAIVARVLAQPFNFLIMDEPTNDLD----FETLDFLER 447
+ + H LSGG + R +AR LA + L+MDE + LD E D L R
Sbjct: 146 ELVGLEGWEHKYPDELSGGMQQRVGLARALAVDPDILLMDEAFSALDPLIRREMQDELLR 205
Query: 448 TITQLQGTILIVSHDRD 464
+LQ TI+ ++HD D
Sbjct: 206 LQAELQKTIVFITHDLD 222