Query gi|254781124|ref|YP_003065537.1| hypothetical protein CLIBASIA_05130 [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 101
No_of_seqs 2 out of 4
Neff 1.2
Searched_HMMs 13730
Date Wed Jun 1 11:28:46 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254781124.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2ea9a1 d.110.8.1 (A:8-110) Hy 37.1 11 0.00079 17.1 2.6 20 22-41 47-66 (103)
2 d1xk4a1 a.39.1.2 (A:1-87) Calc 36.9 11 0.00079 17.1 2.6 50 7-58 18-67 (87)
3 d2inwa1 d.110.8.1 (A:4-120) Hy 34.8 12 0.0009 16.8 2.6 19 23-41 59-77 (117)
4 d1qlsa_ a.39.1.2 (A:) Calcycli 25.4 20 0.0015 15.5 2.4 61 7-69 17-82 (95)
5 d1ksoa_ a.39.1.2 (A:) Calcycli 24.7 15 0.0011 16.2 1.6 53 7-59 17-71 (93)
6 d1k8ua_ a.39.1.2 (A:) Calcycli 23.6 14 0.001 16.4 1.3 52 7-58 17-68 (89)
7 d1e8aa_ a.39.1.2 (A:) Calcycli 15.8 30 0.0022 14.6 1.5 52 7-58 16-69 (87)
8 d3c1va1 a.39.1.2 (A:2-94) Calc 13.4 43 0.0031 13.7 3.6 54 7-60 17-72 (93)
9 d1tl2a_ b.67.1.1 (A:) Tachylec 12.2 24 0.0018 15.1 0.2 18 2-19 95-112 (235)
10 d1tlja_ d.282.1.1 (A:) Hypothe 10.7 53 0.0039 13.1 2.0 20 53-72 19-38 (189)
No 1
>d2ea9a1 d.110.8.1 (A:8-110) Hypothetical protein YfjZ {Escherichia coli [TaxId: 562]}
Probab=37.11 E-value=11 Score=17.08 Aligned_cols=20 Identities=25% Similarity=0.449 Sum_probs=16.2
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q ss_conf 99988999999999877889
Q gi|254781124|r 22 EVRNAFPKILKSIEKALEPY 41 (101)
Q Consensus 22 EVR~AFP~ilKsiEK~L~~~ 41 (101)
..-.|||.+||-+|..|.+=
T Consensus 47 ~Ld~aFP~~i~qle~ml~sG 66 (103)
T d2ea9a1 47 KLDVVFPHFISQIESMLTTG 66 (103)
T ss_dssp HHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHCCC
T ss_conf 99999999999999986459
No 2
>d1xk4a1 a.39.1.2 (A:1-87) Calcyclin (S100) {Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]}
Probab=36.95 E-value=11 Score=17.09 Aligned_cols=50 Identities=16% Similarity=0.262 Sum_probs=35.8
Q ss_pred EECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 2115578754632899998899999999987788999876288623354321
Q gi|254781124|r 7 MYAPKEGNQYRPLRKEVRNAFPKILKSIEKALEPYVDPLIEPVEIGKEGMVD 58 (101)
Q Consensus 7 myapkegnqYRP~r~EVR~AFP~ilKsiEK~L~~~VdPL~~PV~~~~~G~vd 58 (101)
.||-++|+.+-.+++|.+...-+.+...-+ +..|+-++.-+...+.|.||
T Consensus 18 kya~~dG~~~~l~~~Elk~ll~~e~~~~~~--~~~v~~i~~~~D~n~DG~Id 67 (87)
T d1xk4a1 18 KYSLIKGNFHAVYRDDLKKLLETESPQYIR--KKGADVWFKELDINTDGAVN 67 (87)
T ss_dssp HHHTSSSCTTCBCHHHHHHHHHHHSCHHHH--TTCHHHHHHHHCTTCSSSBC
T ss_pred HHCCCCCCCCCCCHHHHHHHHHHHCCCCCC--HHHHHHHHHHHCCCCCCCCC
T ss_conf 981557997715899999999986588666--69999999986789999695
No 3
>d2inwa1 d.110.8.1 (A:4-120) Hypothetical protein YeeU {Shigella flexneri [TaxId: 623]}
Probab=34.84 E-value=12 Score=16.75 Aligned_cols=19 Identities=32% Similarity=0.492 Sum_probs=15.7
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q ss_conf 9988999999999877889
Q gi|254781124|r 23 VRNAFPKILKSIEKALEPY 41 (101)
Q Consensus 23 VR~AFP~ilKsiEK~L~~~ 41 (101)
.-.|||.+||-+|..|.+=
T Consensus 59 Ld~aFP~~ikqlE~ml~sG 77 (117)
T d2inwa1 59 LDQAFPLLMKQLELMLTGG 77 (117)
T ss_dssp HHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHCCC
T ss_conf 9999999999999986447
No 4
>d1qlsa_ a.39.1.2 (A:) Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]}
Probab=25.44 E-value=20 Score=15.51 Aligned_cols=61 Identities=15% Similarity=0.262 Sum_probs=41.1
Q ss_pred EECCCCCCCCCCCHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC-HHHHHHHHHHH
Q ss_conf 2115578754632899998----899999999987788999876288623354321-14899999999
Q gi|254781124|r 7 MYAPKEGNQYRPLRKEVRN----AFPKILKSIEKALEPYVDPLIEPVEIGKEGMVD-EGYRLHICALI 69 (101)
Q Consensus 7 myapkegnqYRP~r~EVR~----AFP~ilKsiEK~L~~~VdPL~~PV~~~~~G~vd-E~Y~~HiC~LI 69 (101)
-||-++|++..-++.|.+. -||.+++. ..=...|+-+..-...-+.|-|| +-|..-|..|.
T Consensus 17 kYa~~~G~~~tLsk~Elk~Ll~~El~~~l~~--~~d~~~vd~im~~LD~n~Dg~vdF~EF~~li~~la 82 (95)
T d1qlsa_ 17 KHAGRDGNNTKISKTEFLIFMNTELAAFTQN--QKDPGVLDRMMKKLDLDSDGQLDFQEFLNLIGGLA 82 (95)
T ss_dssp HHHTTSSCTTCBCHHHHHHHHTTTSHHHHHH--CCCTHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHH
T ss_pred HHHCCCCCCCCCCHHHHHHHHHHHHHHHHCC--CCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
T ss_conf 9737489867277999999999987898658--99889999999986579999596999999999999
No 5
>d1ksoa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a3 [TaxId: 9606]}
Probab=24.70 E-value=15 Score=16.24 Aligned_cols=53 Identities=21% Similarity=0.288 Sum_probs=36.9
Q ss_pred EECCCCCCCCCCCHHHHHHHHHHHHHHH-H-HHHHHHHHHHHHHHHHCCCCCCCH
Q ss_conf 2115578754632899998899999999-9-877889998762886233543211
Q gi|254781124|r 7 MYAPKEGNQYRPLRKEVRNAFPKILKSI-E-KALEPYVDPLIEPVEIGKEGMVDE 59 (101)
Q Consensus 7 myapkegnqYRP~r~EVR~AFP~ilKsi-E-K~L~~~VdPL~~PV~~~~~G~vdE 59 (101)
.||-++|+.|+-+++|.+...-+...+. . ..-+..++-++.-+...+.|.+|-
T Consensus 17 kya~~dGd~~~ls~~Elk~ll~~~~~~~~~~~~~~~~~~~~~~~lD~n~Dg~IdF 71 (93)
T d1ksoa_ 17 EYAGRCGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTNKDCEVDF 71 (93)
T ss_dssp HHHTSSSCTTCEEHHHHHHHHHHHTTTCCCCTTCHHHHHHHHHHHHHTTTCEECH
T ss_pred HHCCCCCCCCEECHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCH
T ss_conf 9837589989687999999999864402456899999999999975799997969
No 6
>d1k8ua_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a6 [TaxId: 9606]}
Probab=23.58 E-value=14 Score=16.42 Aligned_cols=52 Identities=23% Similarity=0.333 Sum_probs=33.2
Q ss_pred EECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 2115578754632899998899999999987788999876288623354321
Q gi|254781124|r 7 MYAPKEGNQYRPLRKEVRNAFPKILKSIEKALEPYVDPLIEPVEIGKEGMVD 58 (101)
Q Consensus 7 myapkegnqYRP~r~EVR~AFP~ilKsiEK~L~~~VdPL~~PV~~~~~G~vd 58 (101)
.||-++|+.+.-++.|.+...-.-+..-.+--...++-++.-+..-+.|-||
T Consensus 17 kya~~dg~~~~ls~~Elk~Ll~~e~~~~~~~~~~~~~~~~~~lD~d~Dg~Id 68 (89)
T d1k8ua_ 17 KYSGREGDKHTLSKKELKELIQKELTIGSKLQDAEIARLMEDLDRNKDQEVN 68 (89)
T ss_dssp HHHTSSSCTTEEEHHHHHHHHHHHSCCGGGTTSHHHHHHHHHHHHTTTCEEE
T ss_pred HHCCCCCCCCEECHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCC
T ss_conf 9746689978436999999999988754238799999999986699999796
No 7
>d1e8aa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]}
Probab=15.81 E-value=30 Score=14.57 Aligned_cols=52 Identities=17% Similarity=0.305 Sum_probs=36.3
Q ss_pred EECCCCCCCCCCCHHHHHHHHHHHHHHHHH-HH-HHHHHHHHHHHHHCCCCCCC
Q ss_conf 211557875463289999889999999998-77-88999876288623354321
Q gi|254781124|r 7 MYAPKEGNQYRPLRKEVRNAFPKILKSIEK-AL-EPYVDPLIEPVEIGKEGMVD 58 (101)
Q Consensus 7 myapkegnqYRP~r~EVR~AFP~ilKsiEK-~L-~~~VdPL~~PV~~~~~G~vd 58 (101)
-||-++|+...-+++|.+...-+.+.++-+ .. ...|+-+..-+...+.|-||
T Consensus 16 kya~~~g~~~~Lsk~Elk~ll~~e~~~~~~~~~~~~~v~~~~~~lD~n~Dg~id 69 (87)
T d1e8aa_ 16 QYSVRKGHFDTLSKGELKQLLTKELANTIKNIKDKAVIDEIFQGLDANQDEQVD 69 (87)
T ss_dssp HHHTSSSSTTEECHHHHHHHHHHHSTTTSTTTTSHHHHHHHHHHHCTTCSSCEE
T ss_pred HHCCCCCCCCEECHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCC
T ss_conf 874568997868699999999987221246789999999999987579998697
No 8
>d3c1va1 a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sapiens), s100a4 [TaxId: 9606]}
Probab=13.41 E-value=43 Score=13.65 Aligned_cols=54 Identities=20% Similarity=0.367 Sum_probs=39.0
Q ss_pred EECCCCCCCCCCCHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHCCCCCCCHH
Q ss_conf 21155787546328999988999999999--8778899987628862335432114
Q gi|254781124|r 7 MYAPKEGNQYRPLRKEVRNAFPKILKSIE--KALEPYVDPLIEPVEIGKEGMVDEG 60 (101)
Q Consensus 7 myapkegnqYRP~r~EVR~AFP~ilKsiE--K~L~~~VdPL~~PV~~~~~G~vdE~ 60 (101)
.|+-++||.+.-+++|.+..+-....+.- ...+..++-++.-+..-+.|.+|-.
T Consensus 17 ~ya~~dg~~~~L~~~Elk~~l~~~~~~~~~~~~~~~~~~~i~~~~D~n~DG~I~F~ 72 (93)
T d3c1va1 17 KYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQ 72 (93)
T ss_dssp HHHTSSSSTTEECHHHHHHHHHHHCHHHHTTCCSHHHHHHHHHHHCTTCSSSEEHH
T ss_pred HHCCCCCCCCEECHHHHHHHHHHHCHHCCCCCCCHHHHHHHHHHHCCCCCCCCCHH
T ss_conf 88567899896679999999997442103568999999999999827999979799
No 9
>d1tl2a_ b.67.1.1 (A:) Tachylectin-2 {Japanese horseshoe crab (Tachypleus tridentatus) [TaxId: 6853]}
Probab=12.24 E-value=24 Score=15.10 Aligned_cols=18 Identities=28% Similarity=0.706 Sum_probs=13.8
Q ss_pred CCCCCEECCCCCCCCCCC
Q ss_conf 753022115578754632
Q gi|254781124|r 2 NPHGLMYAPKEGNQYRPL 19 (101)
Q Consensus 2 nphglmyapkegnqYRP~ 19 (101)
.|+|+.||-.+|.-||-+
T Consensus 95 dP~G~LyaVt~~~LYr~~ 112 (235)
T d1tl2a_ 95 DPNGYLYAVSKDKLYKAS 112 (235)
T ss_dssp CTTSCEEEEETTEEEEES
T ss_pred CCCCEEEEECCCCEECCC
T ss_conf 898239996576432379
No 10
>d1tlja_ d.282.1.1 (A:) Hypothetical protein SSo0622 {Sulfolobus solfataricus [TaxId: 2287]}
Probab=10.66 E-value=53 Score=13.14 Aligned_cols=20 Identities=15% Similarity=0.104 Sum_probs=15.0
Q ss_pred CCCCCCHHHHHHHHHHHHHH
Q ss_conf 35432114899999999998
Q gi|254781124|r 53 KEGMVDEGYRLHICALIKLL 72 (101)
Q Consensus 53 ~~G~vdE~Y~~HiC~LI~LL 72 (101)
.+|+||+.-+..++++|.-.
T Consensus 19 ~~G~vD~~i~~ll~~~iN~~ 38 (189)
T d1tlja_ 19 EIGYLDPDILGFLLAFYRNR 38 (189)
T ss_dssp HTTCSCGGGHHHHHHHHHTC
T ss_pred HCCCCCHHHHHHHHHHHCCC
T ss_conf 77998854899999995589
Done!